 |
PDBsum entry 3c92
|
|
|
|
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
|
|
|
|
|
|
|
|
|
|
Pore analysis for: 3c92 calculated with MOLE 2.0
|
PDB id
|
|
|
|
3c92
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
Pores calculated on whole structure |
 |
Pores calculated excluding ligands
|
|
|
 |
 |
 |
 |
 |
|
 |
|
|
|
 |
 |
|
 |
|
|
|
 |
32 pores,
coloured by radius |
 |
32 pores,
coloured by radius
|
32 pores,
coloured as in list below
|
|
|
 |
 |
 |
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
|
|
 |
|
|
|
 |
Free R
|
 |
|
|
|
|
 |
Length
|
 |
|
|
|
|
 |
HPathy
|
 |
|
|
|
|
 |
HPhob
|
 |
|
|
|
|
 |
Polar
|
 |
|
|
|
|
 |
Rel Mut
|
 |
|
|
|
|
 |
Residue..type
|
 |
|
|
|
|
 |
Ligands
|
 |
|
|
|
|
|
 |
Radius |
 |
1 |
 |
2.28 |
3.17 |
73.7 |
-1.23 |
-0.33 |
17.6 |
83 |
 |
6 |
6 |
6 |
7 |
0 |
0 |
0 |
 |
|
 |
 |
2 |
 |
1.11 |
2.39 |
147.3 |
-0.71 |
-0.37 |
12.0 |
89 |
6 |
8 |
12 |
16 |
1 |
2 |
0 |
|
 |
3 |
 |
2.12 |
2.71 |
158.8 |
-1.11 |
-0.47 |
14.3 |
89 |
8 |
10 |
12 |
17 |
1 |
2 |
0 |
|
 |
4 |
 |
2.15 |
2.10 |
171.2 |
-1.42 |
-0.31 |
19.6 |
85 |
14 |
8 |
12 |
14 |
2 |
0 |
0 |
|
 |
5 |
 |
1.70 |
2.57 |
180.6 |
-0.51 |
-0.26 |
12.5 |
88 |
8 |
12 |
14 |
22 |
2 |
0 |
0 |
|
 |
6 |
 |
1.35 |
2.52 |
192.0 |
-1.17 |
-0.47 |
14.0 |
87 |
6 |
11 |
14 |
18 |
2 |
4 |
0 |
|
 |
7 |
 |
1.09 |
2.39 |
189.6 |
-0.99 |
-0.38 |
14.3 |
86 |
12 |
8 |
13 |
17 |
4 |
2 |
0 |
|
 |
8 |
 |
1.16 |
2.27 |
212.3 |
-1.26 |
-0.49 |
14.4 |
87 |
6 |
14 |
18 |
20 |
2 |
4 |
0 |
|
 |
9 |
 |
1.73 |
2.86 |
222.1 |
-0.88 |
-0.36 |
13.5 |
87 |
8 |
14 |
16 |
24 |
3 |
2 |
0 |
|
 |
10 |
 |
1.75 |
2.75 |
222.8 |
-0.72 |
-0.28 |
13.8 |
86 |
14 |
11 |
15 |
24 |
5 |
0 |
0 |
|
 |
11 |
 |
2.03 |
2.33 |
223.8 |
-1.39 |
-0.54 |
15.4 |
88 |
8 |
15 |
18 |
22 |
2 |
4 |
0 |
|
 |
12 |
 |
2.11 |
2.15 |
245.8 |
-1.10 |
-0.45 |
14.6 |
88 |
13 |
12 |
19 |
21 |
4 |
2 |
0 |
|
 |
13 |
 |
2.16 |
2.20 |
259.4 |
-0.71 |
-0.39 |
11.9 |
88 |
8 |
18 |
20 |
31 |
2 |
2 |
0 |
|
 |
14 |
 |
1.70 |
2.85 |
245.6 |
-1.02 |
-0.40 |
14.1 |
87 |
8 |
17 |
20 |
26 |
3 |
2 |
0 |
|
 |
15 |
 |
1.73 |
3.68 |
249.3 |
-0.99 |
-0.41 |
13.8 |
87 |
8 |
17 |
20 |
26 |
3 |
2 |
0 |
|
 |
16 |
 |
1.69 |
2.86 |
248.5 |
-0.70 |
-0.36 |
11.9 |
88 |
6 |
15 |
19 |
31 |
2 |
4 |
0 |
|
 |
17 |
 |
1.66 |
2.78 |
267.7 |
-0.90 |
-0.34 |
14.2 |
86 |
12 |
12 |
19 |
27 |
4 |
4 |
0 |
|
 |
18 |
 |
1.73 |
2.51 |
267.6 |
-0.66 |
-0.30 |
13.0 |
88 |
14 |
15 |
21 |
26 |
5 |
0 |
0 |
|
 |
19 |
 |
1.20 |
1.67 |
260.6 |
-0.90 |
-0.25 |
13.9 |
84 |
14 |
12 |
23 |
25 |
9 |
2 |
0 |
|
 |
20 |
 |
1.66 |
2.47 |
273.1 |
-0.75 |
-0.27 |
14.3 |
87 |
16 |
12 |
18 |
31 |
4 |
2 |
0 |
|
 |
21 |
 |
1.63 |
2.62 |
270.9 |
-0.50 |
-0.23 |
12.8 |
88 |
11 |
13 |
20 |
32 |
3 |
2 |
0 |
|
 |
22 |
 |
1.81 |
2.56 |
278.6 |
-0.89 |
-0.39 |
14.2 |
87 |
14 |
15 |
20 |
26 |
4 |
2 |
0 |
|
 |
23 |
 |
1.84 |
2.66 |
284.0 |
-0.71 |
-0.31 |
13.4 |
88 |
18 |
15 |
18 |
30 |
4 |
0 |
0 |
|
 |
24 |
 |
1.69 |
2.53 |
281.8 |
-0.56 |
-0.29 |
12.7 |
89 |
13 |
16 |
20 |
31 |
3 |
0 |
0 |
|
 |
25 |
 |
1.25 |
1.34 |
294.9 |
-1.15 |
-0.30 |
14.3 |
82 |
12 |
12 |
24 |
26 |
15 |
2 |
0 |
|
 |
26 |
 |
1.52 |
2.98 |
296.4 |
-0.84 |
-0.34 |
13.7 |
88 |
18 |
11 |
23 |
25 |
5 |
2 |
0 |
|
 |
27 |
 |
1.58 |
2.29 |
302.9 |
-1.13 |
-0.44 |
14.2 |
88 |
13 |
15 |
25 |
26 |
3 |
4 |
0 |
|
 |
28 |
 |
2.03 |
2.41 |
358.4 |
-0.96 |
-0.38 |
13.9 |
87 |
14 |
19 |
26 |
35 |
5 |
2 |
0 |
|
 |
29 |
 |
2.03 |
2.11 |
371.9 |
-1.12 |
-0.42 |
13.9 |
87 |
18 |
20 |
30 |
34 |
5 |
4 |
0 |
|
 |
30 |
 |
1.20 |
1.35 |
370.7 |
-1.17 |
-0.29 |
17.6 |
85 |
24 |
18 |
29 |
32 |
8 |
2 |
0 |
|
 |
31 |
 |
1.59 |
1.59 |
26.8 |
0.43 |
-0.20 |
3.5 |
84 |
1 |
0 |
1 |
4 |
2 |
0 |
0 |
|
 |
32 |
 |
1.90 |
1.99 |
32.0 |
0.85 |
-0.07 |
3.0 |
88 |
1 |
0 |
1 |
7 |
2 |
0 |
0 |
|
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
Residue-type_colouring |
 |
|
 |
|
Positive
|
Negative
|
Neutral
|
Aliphatic
|
Aromatic
|
Pro & Gly
|
Cysteine
|
|
H,K,R
|
D,E
|
S,T,N,Q
|
A,V,L,I,M
|
F,Y,W
|
P,G
|
C
|
|
|
 |