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PDBsum entry 3c6o

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Top Page protein ligands Protein-protein interface(s) tunnels links
Tunnel analysis for: 3c6o calculated with MOLE 2.0 PDB id
3c6o
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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3 tunnels, coloured by tunnel radius 3 tunnels, coloured by tunnel radius 3 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.59 1.60 15.7 3.30 1.29 0.4 75 0 0 0 8 3 0 0  
2 1.59 1.62 16.3 2.99 1.18 0.5 73 0 0 1 8 3 1 0  
3 1.59 1.64 16.4 3.10 1.23 0.4 72 0 0 0 7 3 1 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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