 |
PDBsum entry 3c4x
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Tunnel analysis for: 3c4x calculated with  MOLE 2.0
|
PDB id
|
|
|
|
3c4x
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Tunnels calculated on whole structure |
|
Tunnels calculated excluding ligands
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
|
|
1 tunnel,
coloured by tunnel radius |
|
3 tunnels,
coloured by
tunnel radius
|
3 tunnels,
coloured as in
list below
|
|
|
|
|
|
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
|
|
|
|
|
|
|
Free R
|
|
|
|
|
|
|
Length
|
|
|
|
|
|
|
HPathy
|
|
|
|
|
|
|
HPhob
|
|
|
|
|
|
|
Polar
|
|
|
|
|
|
|
Rel Mut
|
|
|
|
|
|
|
Residue..type
|
|
|
|
|
|
|
Ligands
|
|
|
|
|
|
|
 |
Radius |
 |
1 |
 |
1.71 |
1.73 |
17.7 |
-0.18 |
-0.10 |
17.0 |
68 |
|
2 |
2 |
0 |
3 |
1 |
1 |
0 |
|
ATP 562 B
|
 |
|
2 |
 |
1.35 |
2.12 |
21.7 |
0.19 |
0.07 |
15.9 |
66 |
2 |
2 |
0 |
3 |
2 |
1 |
0 |
ATP 562 B
|
 |
3 |
 |
1.12 |
1.34 |
23.6 |
-0.15 |
-0.17 |
14.3 |
79 |
1 |
3 |
2 |
8 |
1 |
0 |
0 |
ATP 562 A
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
 |
Residue-type_colouring |
 |
|
|
|
Positive
|
Negative
|
Neutral
|
Aliphatic
|
Aromatic
|
Pro & Gly
|
Cysteine
|
|
H,K,R
|
D,E
|
S,T,N,Q
|
A,V,L,I,M
|
F,Y,W
|
P,G
|
C
|
|
|
|
MOLE 2.0 program