spacer
spacer

PDBsum entry 3c4c

Go to PDB code: 
Top Page protein ligands Protein-protein interface(s) pores links
Pore analysis for: 3c4c calculated with MOLE 2.0 PDB id
3c4c
Pores calculated on whole structure Pores calculated excluding ligands

View options
MOLEonline 2.0 manipulation
and
visualization
with HETATM:
without HETATM:
 
1 pore, coloured by radius 4 pores, coloured by radius 4 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.18 1.23 52.2 -1.12 -0.19 21.3 81 4 2 3 4 2 0 0  
2 1.18 1.23 55.4 -2.47 -0.68 28.6 85 4 9 2 2 0 0 0  
3 2.39 2.83 125.6 -1.92 -0.37 25.1 84 9 9 10 3 4 0 0  
4 1.84 1.92 128.5 -1.38 -0.18 23.2 80 8 9 7 9 5 0 0  324 2 A

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
spacer
spacer