PDBsum entry 3c31 Go to PDB code:  Tunnel analysis for: 3c31 calculated with MOLE 2.0 PDB id 3c31 Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   7 tunnels, coloured by tunnel radius 6 tunnels, coloured by tunnel radius 6 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.30 1.65 27.3 -0.82 -0.39 14.8 77 3 2 2 4 0 0 0  GOL 403 A 2 1.33 1.61 37.2 -0.82 -0.39 14.1 86 5 1 3 4 0 0 0  GOL 403 A 3 1.27 1.33 50.8 -0.85 -0.32 12.2 85 4 3 3 7 1 0 0  GOL 402 A GOL 403 A 4 1.37 2.03 51.9 -0.87 -0.41 12.8 84 5 3 4 6 0 2 0  GOL 403 A 5 1.47 2.42 16.3 -1.89 -0.42 30.3 85 5 3 0 2 0 0 0  CL 303 A 6 1.43 2.26 17.0 -1.82 -0.40 30.4 85 5 3 0 2 0 0 0  CL 303 A Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.