PDBsum entry 3c05 Go to PDB code:  Tunnel analysis for: 3c05 calculated with MOLE 2.0 PDB id 3c05 Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   9 tunnels, coloured by tunnel radius 9 tunnels, coloured by tunnel radius 9 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.54 1.71 15.2 -0.68 -0.45 15.7 71 1 2 0 1 0 0 1   2 1.57 1.57 15.9 -1.56 -0.69 17.3 76 3 1 1 0 1 0 0   3 1.60 1.60 16.2 -1.56 -0.65 18.2 72 3 1 1 0 1 0 1   4 1.64 1.86 23.5 -0.91 -0.51 13.1 71 3 1 1 1 1 1 2   5 1.61 1.87 23.5 -0.54 -0.52 10.2 75 2 1 2 2 1 0 2   6 1.25 1.25 23.6 -0.37 -0.29 9.2 64 1 1 2 1 2 0 2   7 1.59 1.77 25.3 -0.90 -0.52 13.2 71 3 1 1 1 1 1 2   8 1.56 1.73 25.4 -0.58 -0.54 10.6 75 2 1 2 2 1 0 2   9 1.23 1.23 25.5 -0.43 -0.33 9.6 64 1 1 2 1 2 0 2   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.