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Ligand clusters for UniProt code P00693

Ligand clusters for P00693: Alpha-amylase type A isozyme OS=Hordeum vulgare GN=AMY1.1 PE=1 SV=1

Top 6 (of 13) ligand clusters
Cluster 1.
5 ligand types
5 ligands
Cluster 2.
5 ligand types
6 ligands
Cluster 3.
5 ligand types
5 ligands
Cluster 4.
1 ligand type
1 ligand
Cluster 5.
1 ligand type
2 ligands
Cluster 6.
1 ligand type
1 ligand
Representative protein: 1ht6A  
 

Structures

PDB   Schematic diagram
1ht6A    
3bshA    
2qpsA    
1rp8A    
2qpuA    
 more ...

 

 Cluster 1 contains 5 ligand types

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Ligand Description


 
1. Ligand: DAF-BGC-GLC × 1
DAF=1,4-Deoxy-4-((5-Hydroxymethyl-2,3,4- Trihydroxycyclohex-5-Enyl)amino)fructose, BGC=Beta-D-Glucose, GLC=Alpha-D-Glucose.
PDB code: 1rp9(A).


 
2. Ligand: DAF-GLC × 1
DAF=1,4-Deoxy-4-((5-Hydroxymethyl-2,3,4- Trihydroxycyclohex-5-Enyl)amino)fructose, GLC=Alpha-D-Glucose.
PDB code: 1rpk(A).


 
3. Ligand: GLC-GLC-GLC-GLC-GLC × 1
GLC=Alpha-D-Glucose.
PDB code: 1rp8(A).


 
4. Ligand: GLC-SGC × 1
SGC=4-Deoxy-4-Thio-Beta-D-Glucopyranose, GLC=Alpha-D-Glucose.
PDB code: 1p6w(A).


 
5. Ligand: QPU × 1
1,5-Anhydro-4-O-(4,6-Dideoxy-4-{[(1s,2s,3s,4r,5s,6r)-2, 3,4,6-Tetrahydroxy-5-
Methylcyclohexyl]amino}-Alpha-D- Glucopyranosyl)-D-Glucitol
PDB code: 2qpu(A).

 

 Cluster 2 contains 5 ligand types

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Ligand Description


 
1. Ligand: GTM × 1
O1-Methyl-4-Deoxy-4-Thio-Beta-D-Glucose
PDB code: 1p6w(A).


 
2. Ligand: DAF-GLC-GLC × 2
DAF=1,4-Deoxy-4-((5-Hydroxymethyl-2,3,4- Trihydroxycyclohex-5-Enyl)amino)fructose, GLC=Alpha-D-Glucose.
PDB codes: 1rp9(A), 1rpk(A).


 
3. Ligand: BGC-SGC-SGC × 1
BGC=Beta-D-Glucose, SGC=4-Deoxy-4-Thio-Beta-D-Glucopyranose.
PDB code: 1p6w(A).


 
4. Ligand: GLC-GLC-GLC-GLC-GLC × 1
GLC=Alpha-D-Glucose.
PDB code: 1rp8(A).


 
5. Ligand: QPU × 1
1,5-Anhydro-4-O-(4,6-Dideoxy-4-{[(1s,2s,3s,4r,5s,6r)-2, 3,4,6-Tetrahydroxy-5-
Methylcyclohexyl]amino}-Alpha-D- Glucopyranosyl)-D-Glucitol
PDB code: 2qpu(A).

 

 Cluster 3 contains 5 ligand types

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Ligand Description


 
1. Ligand: EDO × 1
1,2-Ethanediol
PDB code: 1ht6(A).


 
2. Ligand: BGC × 1
Beta-D-Glucose
PDB code: 3bsh(A).


 
3. Ligand: DAF-GLC × 1
DAF=1,4-Deoxy-4-((5-Hydroxymethyl-2,3,4- Trihydroxycyclohex-5-Enyl)amino)fructose, GLC=Alpha-D-Glucose.
PDB code: 1rpk(A).


 
4. Ligand: DAF-GLC-GLC × 1
DAF=1,4-Deoxy-4-((5-Hydroxymethyl-2,3,4- Trihydroxycyclohex-5-Enyl)amino)fructose, GLC=Alpha-D-Glucose.
PDB code: 1rp9(A).


 
5. Ligand: GLC-GLC-BGC-GLC-GLC-GLC-GLC × 1
GLC=Alpha-D-Glucose, BGC=Beta-D-Glucose.
PDB code: 1rp8(A).

 

 Cluster 4 contains 1 ligand type

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Ligand Description


 
1. Ligand: GLC-SGC × 1
SGC=4-Deoxy-4-Thio-Beta-D-Glucopyranose, GLC=Alpha-D-Glucose.
PDB code: 1p6w(A).

 

 Cluster 5 contains 1 ligand type

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Ligand Description


 
1. Ligand: EDO × 2
1,2-Ethanediol
PDB codes: 1ht6(A),

 

 Cluster 6 contains 1 ligand type

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Ligand Description


 
1. Ligand: EDO × 1
1,2-Ethanediol
PDB code: 1ht6(A).

 

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