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PDBsum entry 3bpo

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Cytokine/cytokine receptor PDB id
3bpo
Contents
Protein chains
98 a.a.
198 a.a.
286 a.a.
Ligands
NAG-NAG
NAG
Waters ×54

References listed in PDB file
Key reference
Title Molecular and structural basis of cytokine receptor pleiotropy in the interleukin-4/13 system.
Authors S.L.Laporte, Z.S.Juo, J.Vaclavikova, L.A.Colf, X.Qi, N.M.Heller, A.D.Keegan, K.C.Garcia.
Ref. Cell, 2008, 132, 259-272. [DOI no: 10.1016/j.cell.2007.12.030]
PubMed id 18243101
Abstract
Interleukin-4 and Interleukin-13 are cytokines critical to the development of T cell-mediated humoral immune responses, which are associated with allergy and asthma, and exert their actions through three different combinations of shared receptors. Here we present the crystal structures of the complete set of type I (IL-4R alpha/gamma(c)/IL-4) and type II (IL-4R alpha/IL-13R alpha1/IL-4, IL-4R alpha/IL-13R alpha1/IL-13) ternary signaling complexes. The type I complex reveals a structural basis for gamma(c)'s ability to recognize six different gamma(c)-cytokines. The two type II complexes utilize an unusual top-mounted Ig-like domain on IL-13R alpha1 for a novel mode of cytokine engagement that contributes to a reversal in the IL-4 versus IL-13 ternary complex assembly sequences, which are mediated through substantially different recognition chemistries. We also show that the type II receptor heterodimer signals with different potencies in response to IL-4 versus IL-13 and suggest that the extracellular cytokine-receptor interactions are modulating intracellular membrane-proximal signaling events.
Figure 1.
Figure 1. Structures of the Type I IL-4, Type II IL-4, and Type II IL-13 Ternary Complexes
(A) The type I complex with IL-4Rα (blue), IL-4 (red), and γ[c] (gold).
(B) The type II IL-4 complex with IL-4Rα (blue), IL-4 (red), and IL-13Rα1 (green).
(C) The type II IL-13 complex with IL-4Rα (blue), IL-13 (yellow-orange), and IL-13Rα1 (green).
The complexes are shown from the side with a cartoon of a membrane underneath (left), and as viewed from the “top” (right). Glycan moieties on Asn residues are shown in ball-and-stick representation. All figures were generated with PyMol (DeLano, 2002).
Figure 2.
Figure 2. Structural Similarity between IL-2Rα and IL-13Rα1 Cytokine Engagement
(A) The quaternary complex of IL-2 (pink), IL-2Rα (cyan), IL-2Rβ (blue), and γ[c] (gold). IL-2Rα is bound to the top surface of IL-2.
(B) Ternary complex of IL-13 (yellow-orange), IL-4Rα (blue), and IL-13Rα1 (green).
(C) As viewed from the top, the overlapping cytokine binding sites by IL-2Rα and IL-13Rα1 D1 domains are apparent. Semitransparent ovals have been drawn around the D1 domain of IL-2Rα and IL-13Rα1 so that regions of overlap are clear.
The above figures are reprinted from an Open Access publication published by Cell Press: Cell (2008, 132, 259-272) copyright 2008.
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