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PDBsum entry 3bkl

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Tunnel analysis for: 3bkl calculated with MOLE 2.0 PDB id
3bkl
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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8 tunnels, coloured by tunnel radius 16 tunnels, coloured by tunnel radius 16 tunnels, coloured as in
list below
Tunnels
Length
Hydropathy
Hydrophobicity
Polarity
Mutability
Residue..type
Ligands
Radius
1 2.08 30.8 -1.70 -0.18 23.0 75 4 5 2 3 4 1 0  706 ACT A,800 KAW A
2 1.36 35.2 -1.10 0.03 19.2 74 4 4 3 6 4 0 0  706 ACT A,800 KAW A
3 1.97 51.4 -1.38 -0.22 16.6 81 4 6 7 4 4 1 0  704 GOL A,706 ACT A,800 KAW A
4 1.31 58.3 -1.09 -0.05 15.7 79 5 5 7 7 4 1 0  704 GOL A,706 ACT A,800 KAW A
5 1.98 60.2 -1.55 -0.36 17.7 84 5 8 9 4 5 0 0  704 GOL A,706 ACT A,800 KAW A
6 1.47 61.0 -1.08 -0.11 16.3 75 5 4 6 4 5 1 1  704 GOL A,706 ACT A,800 KAW A
7 1.36 67.1 -1.22 -0.17 16.3 83 6 7 9 7 5 0 0  704 GOL A,706 ACT A,800 KAW A
8 1.32 67.8 -0.86 0.03 15.4 74 6 3 6 7 5 1 1  704 GOL A,706 ACT A,800 KAW A
9 1.65 5.0 -3.22 -0.48 38.8 80 3 2 1 0 1 0 0  
10 2.69 7.5 -0.33 0.07 2.1 74 0 0 3 1 1 1 1  
11 2.28 3.4 -1.18 0.21 26.9 71 1 2 0 1 1 0 0  
12 2.12 4.8 -1.63 0.02 25.5 63 0 2 0 1 2 0 0  
13 1.40 5.7 -0.71 -0.32 3.0 62 0 0 1 0 1 1 0  
14 1.89 7.5 0.45 -0.06 4.3 98 0 1 1 2 0 0 0  
15 1.91 5.4 1.40 0.23 1.6 55 0 0 0 3 0 1 0  
16 1.83 5.2 -2.41 -0.73 19.4 91 1 2 1 0 0 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program and visualized using Pymol 0.97rc.
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