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PDBsum entry 3bkk

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Tunnel analysis for: 3bkk calculated with MOLE 2.0 PDB id
3bkk
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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9 tunnels, coloured by tunnel radius 16 tunnels, coloured by tunnel radius 16 tunnels, coloured as in
list below
Tunnels
Length
Hydropathy
Hydrophobicity
Polarity
Mutability
Residue..type
Ligands
Radius
1 2.31 31.2 -1.87 -0.25 23.5 76 4 5 2 3 4 0 0  704 KAF A
2 2.32 31.8 -1.26 -0.10 20.1 73 4 5 2 5 4 0 0  704 KAF A
3 1.64 41.2 -1.95 -0.27 23.1 75 4 5 3 3 4 3 0  704 KAF A
4 2.31 43.1 -1.94 -0.28 22.8 77 4 5 4 3 4 1 0  704 KAF A
5 2.31 43.7 -1.44 -0.14 20.5 75 4 5 4 5 4 1 0  704 KAF A
6 2.01 52.8 -1.68 -0.22 20.2 82 5 6 6 4 4 0 0  704 KAF A
7 2.04 53.4 -1.40 -0.15 18.3 80 5 6 6 6 4 0 0  704 KAF A
8 1.62 55.9 -1.62 -0.30 18.6 86 6 8 7 4 4 0 0  704 KAF A
9 2.02 56.5 -1.40 -0.22 17.6 84 6 8 7 6 4 0 0  704 KAF A
10 1.46 60.1 -1.29 -0.08 19.0 75 6 6 5 4 5 1 1  704 KAF A
11 1.51 60.7 -1.09 -0.02 18.1 74 6 6 5 6 5 1 1  704 KAF A
12 2.44 8.8 -0.76 0.03 2.1 70 0 0 2 1 1 2 0  
13 2.38 7.7 -1.96 -0.53 19.7 77 2 1 0 0 0 1 0  
14 2.34 9.5 -2.06 -0.57 21.8 77 2 1 0 0 0 2 0  
15 1.45 6.9 -1.26 0.27 23.7 75 1 2 1 1 2 0 0  
16 1.83 5.5 0.54 0.06 3.8 98 0 1 1 2 0 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program and visualized using Pymol 0.97rc.
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