PDBsum entry 3bkj Go to PDB code:  Pore analysis for: 3bkj calculated with MOLE 2.0 PDB id 3bkj Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   4 pores, coloured by radius 4 pores, coloured by radius 4 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 3.00 3.00 31.6 -1.17 -0.56 16.1 78 3 2 1 3 0 1 0   2 2.29 2.46 41.0 -1.90 -0.68 23.4 85 3 3 4 1 1 1 0   3 3.05 3.09 52.0 -1.31 -0.45 18.1 79 3 4 2 1 0 4 0   4 2.29 2.45 61.3 -1.53 -0.57 21.6 81 5 4 4 4 1 1 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.