PDBsum entry 3bfu Go to PDB code:  Pore analysis for: 3bfu calculated with MOLE 2.0 PDB id 3bfu Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   13 pores, coloured by radius 13 pores, coloured by radius 13 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.12 1.38 31.4 -1.46 0.15 19.8 81 4 0 1 4 2 0 0   2 2.68 3.81 36.6 -3.18 -0.63 43.0 81 7 5 0 2 0 1 0   3 2.62 2.79 36.9 -2.90 -0.57 40.5 82 8 5 0 3 0 1 0   4 1.79 1.94 38.0 -1.83 -0.40 27.1 86 6 3 2 6 0 0 0   5 1.68 2.83 43.4 -2.44 -0.61 31.9 86 10 5 3 2 0 0 0   6 2.92 4.49 48.4 -2.21 -0.55 30.0 84 6 8 1 2 1 1 0   7 3.19 4.37 50.2 -2.70 -0.50 39.1 73 7 5 1 3 1 0 0   8 2.70 3.82 52.1 -2.21 -0.54 29.6 82 8 6 1 2 1 1 0   9 2.63 2.79 52.4 -2.20 -0.52 30.4 83 9 6 1 3 1 1 0   10 2.70 3.83 70.0 -2.92 -0.55 40.5 77 11 8 2 3 1 1 0   11 2.21 2.33 76.5 -2.01 -0.58 27.6 85 13 7 3 6 0 0 0   12 1.94 2.49 91.4 -1.80 -0.41 26.3 85 18 6 5 7 1 1 0   13 1.79 1.94 97.0 -1.86 -0.40 27.7 83 14 8 2 7 1 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.