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PDBsum entry 3beq

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Top Page protein ligands metals Protein-protein interface(s) tunnels links
Tunnel analysis for: 3beq calculated with MOLE 2.0 PDB id
3beq
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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19 tunnels, coloured by tunnel radius 14 tunnels, coloured by tunnel radius 14 tunnels, coloured as in
list below
Tunnels
Length
Hydropathy
Hydrophobicity
Polarity
Mutability
Residue..type
Ligands
Radius
1 1.55 18.8 -1.69 -0.64 23.1 85 3 4 1 1 0 0 1  1000 PO4 A,3002 ACT A,3003 ACT A
2 1.57 16.4 -1.23 -0.57 18.1 86 3 2 1 1 0 0 1  1004 GOL B,3001 ACT B,3004 ACT B
3 1.39 10.1 -0.60 -0.22 11.7 63 1 0 1 1 0 2 2  
4 2.07 5.6 -2.89 -0.73 29.7 91 3 1 1 0 0 0 0  
5 1.55 9.2 -2.10 -0.34 30.1 66 1 2 0 2 1 0 0  
6 1.49 9.4 -2.06 -0.09 28.3 66 1 2 0 1 1 0 0  
7 1.34 8.6 -1.58 0.17 18.1 74 1 1 1 0 2 0 0  
8 1.70 9.1 -1.40 -0.18 12.9 79 1 1 1 0 1 0 0  
9 1.63 10.3 -1.24 -0.66 15.2 66 1 1 0 0 2 0 0  
10 1.48 7.9 -1.59 -0.74 2.7 101 0 1 3 1 0 0 0  
11 1.32 9.3 -1.00 -0.19 16.5 71 1 0 1 1 0 0 1  
12 1.66 5.1 1.58 1.03 6.6 77 1 0 1 3 1 0 0  
13 1.37 9.2 0.62 0.08 2.2 80 0 1 1 4 2 0 0  
14 1.73 3.6 0.38 0.05 2.1 73 0 0 0 2 1 1 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program and visualized using Pymol 0.97rc.
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