PDBsum entry 3b6g Go to PDB code:  Pore analysis for: 3b6g calculated with MOLE 2.0 PDB id 3b6g Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   24 pores, coloured by radius 20 pores, coloured by radius 20 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 3.08 3.08 29.2 -0.48 -0.61 6.5 103 1 0 3 1 0 0 0  DG -59 I DC -58 I DA -57 I DG - 56 I DT 19 I DT 20 I DC -25 J DG 61 J DG 62 J 2 3.54 3.54 32.4 -1.25 -0.75 14.0 84 3 1 1 0 0 0 0  DC -64 I DA -63 I DC -62 I DC - 61 I DT 19 I DT 20 I DG -16 J DG - 15 J DG 58 J DA 60 J DG 61 J DG 62 J 3 3.71 3.74 33.0 -1.61 -0.67 18.8 74 4 0 0 0 0 0 0  DG -15 I DC - 14 I DC 59 I DA 60 I DG 61 I DG 62 I DC -65 J DC - 64 J DA -63 J DC -62 J DC -58 J DA - 57 J DT 19 J DT 20 J DG 21 J 4 3.71 3.73 33.7 -1.65 -0.70 17.3 88 4 1 3 1 0 0 0  DC 59 I DA 60 I DG 61 I DC -64 J DA -63 J DC - 62 J DG -56 J DT 19 J 5 1.67 2.32 37.7 -1.97 -0.55 18.3 75 3 1 2 2 0 1 0  DC 59 I DA 60 I DG 61 I DC -65 J DC -64 J DA - 63 J DC -62 J 6 1.50 2.57 47.1 -1.65 -0.52 20.0 78 6 0 0 1 0 1 0  DG -2 I DA -1 I DA 0 I DT 1 I DT -4 J DG -2 J DA - 1 J DT 0 J DT 69 J DT 70 J DG 71 J 7 2.70 2.72 50.5 -1.75 -0.62 19.9 89 6 1 4 2 0 0 0  DA -45 I DA 29 I DG 30 I DT 31 I DG -35 J DC - 25 J DA 40 J DC 41 J 8 1.67 2.31 54.5 -1.58 -0.61 14.0 76 3 1 2 2 0 1 0  DG -15 I DC -14 I DA 60 I DG 61 I DG 62 I DC - 65 J DC -64 J DC -58 J DA - 57 J DT 19 J DT 20 J DG 21 J 9 2.60 2.60 55.6 -1.53 -0.68 16.8 91 5 1 5 1 0 0 0  DC -64 I DA -63 I DC -62 I DC -61 I DG - 56 I DT 19 I DC -25 J DG 58 J DA 60 J DG 61 J 10 2.71 2.70 57.2 -1.20 -0.47 17.0 97 3 0 5 4 0 0 0  DT -54 I DA -53 I DC -52 I DT -51 I DC -48 I DA - 47 I DA - 46 I DA 29 I DG 30 I DT 31 I DT 32 I DT 33 I DG - 35 J DC -25 J DG 48 J DG 49 J DT 50 J 11 1.99 2.00 59.8 -1.86 -0.45 22.3 72 5 0 1 1 0 2 0  DC -65 I DC -64 I DA -63 I DC -62 I DC - 61 I DG 58 J DT 69 J DT 70 J DG 71 J 12 2.72 2.75 63.3 -1.49 -0.64 16.4 92 4 0 4 2 0 0 0  DG -56 I DC -48 I DA -47 I DA - 46 I DA 29 I DG 30 I DT 31 I DT 32 I DT 33 I DG - 35 J DC -25 J 13 1.18 1.33 67.1 -1.54 -0.75 17.5 85 7 2 2 0 0 1 0  DT -36 I DG -35 I DA 40 I DT 47 I DG 48 I DT - 51 J DA -47 J DA -46 J DA -45 J DA -44 J DG - 43 J DT -36 J DG -35 J DA 40 J DC 41 J 14 2.59 3.10 71.3 -2.20 -0.50 26.9 76 12 4 1 1 3 0 0  DA -45 I DG -35 J DA 40 J 15 2.56 2.75 72.7 -2.03 -0.60 21.9 85 11 2 8 2 3 0 0  DC -25 J 16 2.59 2.73 73.1 -1.63 -0.68 19.6 90 7 2 5 2 0 0 0  DT -36 I DG -35 I DG -34 I DC -25 I DA 40 I DG - 56 J DA -46 J DA -45 J DT -36 J DG - 35 J DA 29 J DG 30 J DT 31 J DA 40 J DC 41 J 17 1.22 1.22 79.4 -1.27 -0.65 14.0 91 7 0 5 2 0 1 0  DC -25 I DT 47 I DG 48 I DG -56 J DA -47 J DA - 46 J DA -45 J DA -44 J DG - 43 J DA 29 J DG 30 J DT 31 J 18 2.47 2.99 84.0 -2.05 -0.39 20.7 86 11 2 14 2 6 0 0  DC -25 I DG -56 J DC -25 J DA 29 J 19 2.13 2.14 86.7 -1.70 -0.60 18.8 84 7 1 5 2 0 2 0  DC -65 I DC -64 I DG -56 I DT 19 I DC - 25 J DA 60 J DG 61 J DT 69 J DT 70 J DG 71 J 20 1.36 1.40 97.5 -2.11 -0.50 24.5 83 16 3 3 3 3 0 0  DT 47 I DG 48 I DT -51 J DA -47 J DA -46 J DA - 45 J DA -44 J DG -43 J Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.