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PDBsum entry 3b64

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protein ligands links
Cytokine PDB id
3b64

 

 

 

 

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Contents
Protein chain
112 a.a. *
Ligands
IPA
Waters ×120
* Residue conservation analysis
PDB id:
3b64
Name: Cytokine
Title: Macrophage migration inhibitory factor (mif) from /leishmania major
Structure: Macrophage migration inhibitory factor-like protein. Chain: a. Engineered: yes
Source: Leishmania major. Expressed in: escherichia coli.
Resolution:
1.03Å     R-factor:   0.139     R-free:   0.157
Authors: S.Zierow,Y.Cho,E.Lolis
Key ref: D.Kamir et al. (2008). A Leishmania ortholog of macrophage migration inhibitory factor modulates host macrophage responses. J Immunol, 180, 8250-8261. PubMed id: 18523291
Date:
27-Oct-07     Release date:   10-Jun-08    
PROCHECK
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 Headers
 References

Protein chain
Pfam   ArchSchema ?
Q4Q413  (Q4Q413_LEIMA) -  L-dopachrome isomerase from Leishmania major
Seq:
Struc:
113 a.a.
112 a.a.
Key:    PfamA domain  Secondary structure  CATH domain

 Enzyme reactions 
   Enzyme class: E.C.?
[IntEnz]   [ExPASy]   [KEGG]   [BRENDA]

 

 
J Immunol 180:8250-8261 (2008)
PubMed id: 18523291  
 
 
A Leishmania ortholog of macrophage migration inhibitory factor modulates host macrophage responses.
D.Kamir, S.Zierow, L.Leng, Y.Cho, Y.Diaz, J.Griffith, C.McDonald, M.Merk, R.A.Mitchell, J.Trent, Y.Chen, Y.K.Kwong, H.Xiong, J.Vermeire, M.Cappello, D.McMahon-Pratt, J.Walker, J.Bernhagen, E.Lolis, R.Bucala.
 
  ABSTRACT  
 
Parasitic organisms have evolved specialized strategies to evade immune defense mechanisms. We describe herein an ortholog of the cytokine, macrophage migration inhibitory factor (MIF), which is produced by the obligate intracellular parasite, Leishmania major. The Leishmania MIF protein, Lm1740MIF, shows significant structural homology with human MIF as revealed by a high-resolution x-ray crystal structure (1.03 A). Differences between the two proteins in the N-terminal tautomerization site are evident, and we provide evidence for the selective, species-specific inhibition of MIF by small-molecule antagonists that target this site. Lm1740MIF shows significant binding interaction with the MIF receptor, CD74 (K(d) = 2.9 x 10(-8) M). Like its mammalian counterpart, Lm1740MIF induces ERK1/2 MAP kinase activation in a CD74-dependent manner and inhibits the activation-induced apoptosis of macrophages. The ability of Lm1740MIF to inhibit apoptosis may facilitate the persistence of Leishmania within the macrophage and contribute to its evasion from immune destruction.
 

Literature references that cite this PDB file's key reference

  PubMed id Reference
  21349100 E.Mougneau, F.Bihl, and N.Glaichenhaus (2011).
Cell biology and immunology of Leishmania.
  Immunol Rev, 240, 286-296.  
20804783 F.Li, S.Huang, L.Wang, J.Yang, H.Zhang, L.Qiu, L.Li, and L.Song (2011).
A macrophage migration inhibitory factor like gene from scallop Chlamys farreri: Involvement in immune response and wound healing.
  Dev Comp Immunol, 35, 62-71.  
20017116 R.L.Rich, and D.G.Myszka (2010).
Grading the commercial optical biosensor literature-Class of 2008: 'The Mighty Binders'.
  J Mol Recognit, 23, 1.  
19155217 A.M.Filip, J.Klug, S.Cayli, S.Fröhlich, T.Henke, P.Lacher, R.Eickhoff, P.Bulau, M.Linder, C.Carlsson-Skwirut, L.Leng, R.Bucala, S.Kraemer, J.Bernhagen, and A.Meinhardt (2009).
Ribosomal protein S19 interacts with macrophage migration inhibitory factor and attenuates its pro-inflammatory function.
  J Biol Chem, 284, 7977-7985.  
19179453 L.Prieto-Lafuente, W.F.Gregory, J.E.Allen, and R.M.Maizels (2009).
MIF homologues from a filarial nematode parasite synergize with IL-4 to induce alternative activation of host macrophages.
  J Leukoc Biol, 85, 844-854.  
19827093 S.E.Dobson, K.D.Augustijn, J.A.Brannigan, C.Schnick, C.J.Janse, E.J.Dodson, A.P.Waters, and A.J.Wilkinson (2009).
The crystal structures of macrophage migration inhibitory factor from Plasmodium falciparum and Plasmodium berghei.
  Protein Sci, 18, 2578-2591.
PDB codes: 2wkb 2wkf
19665027 V.Schwartz, H.Lue, S.Kraemer, J.Korbiel, R.Krohn, K.Ohl, R.Bucala, C.Weber, and J.Bernhagen (2009).
A functional heteromeric MIF receptor formed by CD74 and CXCR4.
  FEBS Lett, 583, 2749-2757.  
The most recent references are shown first. Citation data come partly from CiteXplore and partly from an automated harvesting procedure. Note that this is likely to be only a partial list as not all journals are covered by either method. However, we are continually building up the citation data so more and more references will be included with time. Where a reference describes a PDB structure, the PDB codes are shown on the right.

 

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