PDBsum entry 3b3q Go to PDB code:  Tunnel analysis for: 3b3q calculated with MOLE 2.0 PDB id 3b3q Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   6 tunnels, coloured by tunnel radius 6 tunnels, coloured by tunnel radius 6 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.52 1.68 26.9 -0.18 -0.32 10.0 74 2 2 1 3 0 1 2   2 1.30 1.40 17.6 -1.53 -0.68 11.8 97 2 0 7 0 1 1 0   3 1.30 1.48 24.4 -1.65 -0.74 10.1 86 0 2 6 1 1 2 0   4 1.16 1.16 16.0 1.09 0.31 9.7 70 1 2 0 3 2 0 0   5 1.17 1.17 16.6 1.23 0.31 6.6 68 2 0 0 3 2 0 0   6 1.15 1.33 16.2 -0.91 -0.42 17.6 91 2 2 2 2 0 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.