PDBsum entry 3ayw Go to PDB code:  Pore analysis for: 3ayw calculated with MOLE 2.0 PDB id 3ayw Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   19 pores, coloured by radius 20 pores, coloured by radius 20 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 2.61 3.39 26.9 -1.86 -0.86 23.5 86 2 2 2 0 0 0 0  DA 28 I DT 37 I DA 113 I DC 114 I DA 173 J DA 174 J DA 175 J DG 185 J DT 250 J DT 251 J DT 252 J DC 260 J 2 3.76 3.98 27.0 -1.71 -0.70 18.0 89 3 1 3 1 0 0 0  DG 18 I DT 92 I DC 195 J DG 205 J DC 206 J DG 280 J DG 281 J 3 3.04 3.14 30.4 -1.54 -0.66 16.1 88 3 0 4 1 0 1 0  DA 28 I DA 102 I DG 103 I DT 104 I DT 105 I DG 185 J DC 195 J 4 2.95 3.04 32.5 -0.43 -0.17 8.8 91 3 0 5 1 1 1 0  DT 20 I DT 21 I DC 22 I DT 23 I DC 195 J DG 267 J DT 269 J DA 270 J DG 271 J 5 2.18 2.40 36.4 -2.35 -0.63 25.7 84 6 2 3 1 0 0 0   6 2.31 4.59 48.4 -2.10 -0.33 23.1 74 10 1 2 1 3 0 0  DA 28 I DG 185 J 7 2.34 4.65 50.4 -2.21 -0.26 24.8 75 11 1 2 1 3 0 0  DA 28 I DG 185 J 8 2.53 2.53 51.9 -1.68 -0.58 19.8 89 5 1 5 2 1 0 0  DT 48 I DA 165 J DA 174 J DA 175 J DT 250 J DT 251 J DT 252 J 9 2.33 4.55 63.1 -1.90 -0.46 18.9 82 9 1 6 1 2 1 0  DA 102 I DC 195 J 10 2.35 4.65 65.1 -2.01 -0.44 19.7 82 10 1 6 1 2 1 0  DA 102 I DC 195 J 11 1.86 3.41 66.1 -2.74 -0.34 33.3 76 11 3 2 1 3 0 0  DA 173 J DA 174 J DA 175 J DT 250 J DT 251 J DT 252 J 12 2.05 2.07 72.3 -1.35 -0.61 13.9 88 7 0 5 2 1 1 0  CL 1001 G DA 102 I DG 103 I DA 110 I DA 111 I DT 180 J DA 187 J DA 188 J DC 190 J DC 195 J 13 1.71 3.37 78.3 -2.36 -0.58 30.2 80 10 5 3 1 1 0 0  DG 39 I DG 40 I DA 41 I DA 173 J DA 174 J DA 175 J DG 249 J DT 250 J DT 251 J DT 252 J 14 1.78 3.35 81.6 -1.77 -0.36 17.8 84 8 2 12 4 6 1 0  DT 48 I DA 102 I DA 165 J DC 195 J 15 2.99 2.99 82.0 -1.35 -0.71 14.8 90 6 1 3 1 0 0 0  DG 39 I DG 40 I DA 41 I DA 42 I DA 173 J DA 174 J DA 175 J DG 249 J DT 250 J DT 251 J DT 252 J DC 253 J DC 254 J DA 255 J DA 256 J DA 257 J 16 1.83 3.40 83.5 -1.96 -0.49 20.5 83 8 1 7 3 3 0 0  DT 48 I DA 165 J 17 2.58 2.75 100.1 -1.41 -0.61 16.7 87 6 2 5 2 1 0 0  DT 37 I DT 48 I DA 113 I DC 114 I DA 115 I DC 116 I DA 165 J DA 175 J DT 180 J DA 181 J DT 182 J DT 183 J DC 260 J DA 261 J 18 1.35 1.39 102.3 -1.26 -0.27 19.9 79 9 0 2 8 0 1 0  CL 1001 A DT 64 I DT 65 I DC 66 I DA 67 I DG 68 I DC 69 I DT 70 I DG 71 I DA 72 I DA 73 I DT 74 I D A 218 J DT 220 J DG 227 J DA 228 J DA 231 J DT 232 J MN 1003 J 19 2.87 3.10 120.8 -1.43 -0.70 16.5 82 9 2 2 0 0 0 0  DT 37 I DT 38 I DG 39 I DG 40 I DA 41 I DA 42 I D A 113 I DC 114 I DA 115 I DC 116 I DA 175 J DT 180 J DA 181 J DT 182 J DT 183 J DG 249 J DT 250 J DT 251 J DT 252 J DC 253 J DC 254 J DA 255 J DA 256 J DA 257 J DC 260 J DA 261 J 20 1.35 1.43 141.4 -1.53 -0.47 17.6 78 10 0 2 4 0 3 0  DT 8 I DC 9 I DT 64 I DT 65 I DC 66 I DA 67 I DG 68 I DC 69 I DT 70 I DG 71 I DA 72 I DA 73 I DT 74 I DG 205 J DC 206 J DC 215 J DT 216 J DA 218 J DT 220 J DG 227 J DA 228 J DA 231 J DT 232 J DA 279 J DG 280 J DG 281 J DT 282 J DT 288 J DT 289 J DG 290 J DT 292 J MN 1003 J MN 1004 J Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.