PDBsum entry 3av6 Go to PDB code:  Pore analysis for: 3av6 calculated with MOLE 2.0 PDB id 3av6 Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   8 pores, coloured by radius 8 pores, coloured by radius 8 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.72 1.71 82.4 -2.32 -0.57 26.6 77 7 6 2 2 2 1 0   2 1.76 1.97 102.1 -2.16 -0.59 20.7 80 6 7 8 2 2 1 0   3 1.86 1.85 101.3 -1.81 -0.44 21.8 82 11 10 9 6 6 4 0   4 2.23 3.13 136.3 -1.80 -0.54 23.6 86 18 13 13 7 2 4 1   5 1.66 1.66 36.0 -1.23 -0.27 13.1 77 4 4 6 6 2 3 0   6 2.32 2.76 41.6 -1.09 -0.28 15.4 73 2 4 7 7 2 4 0   7 2.28 2.76 45.0 -1.01 -0.23 19.8 74 5 5 4 6 1 4 0   8 1.84 2.80 71.1 -1.64 -0.41 15.8 79 2 3 3 2 1 2 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.