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PDBsum entry 3ask

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Top Page protein ligands metals Protein-protein interface(s) pores links
Pore analysis for: 3ask calculated with MOLE 2.0 PDB id
3ask
Pores calculated on whole structure Pores calculated excluding ligands

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13 pores, coloured by radius 11 pores, coloured by radius 11 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 2.46 2.67 38.0 -2.00 -0.48 26.0 86 4 3 2 3 0 1 1  
2 1.48 1.48 41.0 -1.44 -0.42 16.4 79 4 1 0 2 1 2 0  
3 1.28 1.55 44.2 -0.71 -0.24 12.9 84 5 2 2 4 1 2 0  
4 1.70 1.79 104.9 -1.87 -0.43 27.7 85 16 9 5 7 0 1 0  
5 1.85 2.08 106.1 -1.91 -0.43 27.9 84 15 8 6 8 0 2 0  
6 1.49 1.51 120.5 -1.87 -0.48 23.9 82 14 11 5 4 1 3 0  
7 1.32 1.60 121.8 -1.85 -0.47 24.2 80 14 11 4 5 1 4 0  
8 1.29 1.57 124.2 -1.40 -0.40 17.3 81 9 9 6 6 4 4 0  
9 1.44 1.46 133.7 -2.07 -0.50 26.0 82 14 13 6 4 2 3 0  
10 1.47 1.58 136.0 -2.08 -0.51 25.6 80 15 12 6 5 2 4 0  
11 2.92 4.48 146.1 -2.61 -0.60 32.9 80 20 16 4 3 0 3 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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