PDBsum entry 3arf Go to PDB code:  Tunnel analysis for: 3arf calculated with MOLE 2.0 PDB id 3arf Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   7 tunnels, coloured by tunnel radius 8 tunnels, coloured by tunnel radius 8 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.28 1.43 21.7 -2.11 -0.11 25.1 69 3 1 2 1 4 0 0   2 1.25 1.51 23.4 -0.70 -0.21 9.5 74 2 0 3 2 3 0 0   3 1.28 1.42 23.8 -1.55 -0.26 18.9 71 2 1 2 1 4 0 0   4 1.21 1.49 32.0 -0.69 -0.17 13.9 72 3 1 2 2 5 0 0   5 1.20 1.32 21.6 -0.65 -0.25 9.4 73 2 1 0 1 2 0 0   6 1.20 1.24 22.9 -0.80 -0.22 9.9 70 2 1 0 1 3 0 0   7 1.20 1.32 23.4 -0.77 -0.15 11.4 76 2 1 1 2 2 0 0   8 1.20 1.34 24.7 -0.92 -0.15 11.7 74 2 1 1 2 3 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.