PDBsum entry 3aoh Go to PDB code:  Pore analysis for: 3aoh calculated with MOLE 2.0 PDB id 3aoh Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   20 pores, coloured by radius 27 pores, coloured by radius 27 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.10 1.47 29.7 -1.60 -0.32 20.6 73 3 2 1 4 2 1 0   2 1.66 1.86 107.7 -1.81 -0.40 25.1 79 8 7 3 7 3 4 0   3 1.51 2.65 127.1 -1.30 -0.41 19.2 79 11 12 5 8 5 1 0   4 1.32 3.07 137.1 -1.73 -0.32 21.5 78 8 11 10 15 4 6 0   5 1.74 4.49 168.1 -1.81 -0.34 24.2 80 11 21 12 15 7 5 0   6 1.55 1.62 182.3 -1.33 -0.25 20.2 79 20 8 9 17 3 3 0   7 1.34 1.35 197.9 -2.07 -0.42 28.6 80 25 13 10 13 5 4 0  DC 19 P DC 5 Q 8 1.20 1.36 205.8 -2.00 -0.50 24.3 84 21 8 6 9 2 1 0  DC 19 P DC 20 P DG 4 Q DC 5 Q 9 2.29 3.13 214.5 -2.12 -0.40 25.6 81 18 17 12 12 5 7 0   10 1.34 1.40 214.5 -1.83 -0.37 27.4 80 10 13 4 13 5 4 0   11 2.07 2.09 225.4 -1.70 -0.30 19.9 80 18 14 16 13 5 8 0  MG 2006 N 12 1.61 2.25 246.7 -1.79 -0.38 23.9 81 23 19 8 17 6 7 0  DG 24 P DG 4 Q DC 5 Q 13 1.35 1.45 245.7 -2.13 -0.54 27.6 80 22 26 7 10 5 5 0   14 1.15 1.48 258.8 -1.94 -0.40 25.6 79 14 16 5 12 7 5 0   15 1.20 1.63 265.9 -1.57 -0.36 23.4 81 18 26 9 18 7 11 0   16 1.39 2.03 294.2 -1.36 -0.29 22.6 84 27 20 8 21 6 5 0   17 1.58 2.64 292.9 -1.61 -0.34 22.4 80 24 24 19 25 8 3 0   18 1.63 3.27 292.3 -2.02 -0.30 26.9 82 25 21 13 16 9 5 0  DG 24 P DG 4 Q DC 5 Q 19 1.61 3.56 303.3 -1.65 -0.37 23.7 82 29 27 12 19 7 4 0   20 1.19 1.45 294.0 -1.72 -0.47 22.6 78 27 26 10 18 8 11 0   21 1.24 1.45 321.5 -1.52 -0.38 21.4 83 29 14 8 21 3 7 0  DG 24 P DG 4 Q DC 5 Q 22 1.82 2.31 330.4 -1.46 -0.28 22.4 83 30 29 12 23 11 6 0   23 1.44 1.49 365.0 -1.66 -0.33 25.5 82 32 32 8 20 7 6 0   24 1.18 1.69 394.2 -1.48 -0.39 20.5 84 31 19 13 24 5 8 0  DC 23 P DG 24 P DG 4 Q 25 1.57 1.61 417.0 -1.81 -0.31 24.9 82 38 24 20 26 10 3 0  DG 24 P DG 4 Q DC 5 Q 26 1.46 1.46 429.7 -1.74 -0.33 25.4 82 35 25 9 23 5 9 0  DG 24 P DG 4 Q DC 5 Q 27 1.85 2.16 455.1 -1.41 -0.29 21.8 83 43 33 19 34 12 4 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.