PDBsum entry 3aji Go to PDB code:  Pore analysis for: 3aji calculated with MOLE 2.0 PDB id 3aji Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   6 pores, coloured by radius 8 pores, coloured by radius 8 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 2.94 3.06 32.2 -2.11 -0.61 24.4 88 7 3 5 1 0 0 0   2 1.14 1.58 37.4 -1.59 -0.18 23.1 83 5 4 4 5 2 0 0   3 2.92 3.06 41.9 -1.40 -0.75 14.1 92 4 3 5 1 0 0 0  PBF 85 C 4 1.13 1.57 43.4 -1.51 -0.40 17.3 82 4 4 5 4 2 0 0   5 2.90 4.65 47.3 -1.88 -0.61 22.3 90 7 4 6 2 0 0 0  PBF 85 C 6 2.49 4.55 49.9 -2.28 -0.64 27.4 85 9 5 6 1 0 0 0   7 1.13 1.54 65.3 -1.62 -0.50 21.3 81 6 8 5 5 2 0 0  PBF 85 A 8 2.48 4.53 95.6 -2.15 -0.66 26.5 86 10 10 7 3 0 0 0  PBF 85 C Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.