PDBsum entry 3afc Go to PDB code:  Tunnel analysis for: 3afc calculated with MOLE 2.0 PDB id 3afc Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   5 tunnels, coloured by tunnel radius 5 tunnels, coloured by tunnel radius 5 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.43 1.45 18.6 0.07 -0.31 2.2 90 0 0 3 3 1 0 1   2 1.37 1.37 18.7 0.28 -0.19 2.1 85 0 0 3 2 1 1 1   3 1.43 1.44 19.0 0.02 -0.29 2.2 90 0 0 3 2 1 1 1   4 1.20 1.29 18.1 0.21 -0.29 2.1 83 0 0 3 2 1 1 1   5 1.80 3.47 19.1 -1.25 -0.01 17.0 77 1 0 1 1 2 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.