PDBsum entry 3aaa Go to PDB code:  Tunnel analysis for: 3aaa calculated with MOLE 2.0 PDB id 3aaa Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   4 tunnels, coloured by tunnel radius 4 tunnels, coloured by tunnel radius 4 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.21 1.66 17.1 -1.51 -0.58 10.3 92 1 1 3 1 0 1 0   2 1.21 1.66 21.7 -0.56 -0.04 3.2 80 0 1 4 2 1 2 0   3 1.21 1.66 24.7 -1.38 -0.64 11.1 97 1 1 4 1 0 1 0   4 1.21 1.66 33.2 -0.56 0.02 9.2 80 2 2 3 4 1 2 1   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.