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PDBsum entry 3a8n
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Tunnel analysis for: 3a8n calculated with  MOLE 2.0
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PDB id
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3a8n
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Tunnels calculated on whole structure |
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Tunnels calculated excluding ligands
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25 tunnels,
coloured by tunnel radius |
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25 tunnels,
coloured by
tunnel radius
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25 tunnels,
coloured as in
list below
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Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.31 |
1.38 |
15.7 |
1.00 |
0.11 |
7.1 |
90 |
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1 |
0 |
2 |
5 |
0 |
0 |
1 |
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2 |
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1.41 |
1.41 |
18.0 |
-0.18 |
-0.08 |
7.9 |
84 |
2 |
1 |
2 |
4 |
2 |
0 |
1 |
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3 |
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1.70 |
1.72 |
18.9 |
1.55 |
0.03 |
1.2 |
91 |
0 |
0 |
3 |
7 |
0 |
0 |
0 |
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4 |
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1.40 |
1.40 |
18.9 |
-0.25 |
-0.11 |
8.2 |
82 |
2 |
1 |
2 |
5 |
2 |
0 |
1 |
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5 |
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1.88 |
2.79 |
19.1 |
2.44 |
0.75 |
2.0 |
84 |
1 |
0 |
2 |
7 |
2 |
0 |
0 |
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6 |
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2.00 |
3.23 |
19.2 |
2.58 |
0.81 |
1.9 |
81 |
1 |
0 |
2 |
7 |
2 |
0 |
1 |
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7 |
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1.67 |
1.67 |
20.2 |
0.20 |
-0.21 |
7.8 |
86 |
1 |
1 |
2 |
4 |
0 |
0 |
2 |
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8 |
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1.98 |
2.66 |
20.2 |
1.29 |
0.31 |
6.1 |
78 |
0 |
1 |
2 |
6 |
1 |
0 |
1 |
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9 |
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1.98 |
2.64 |
20.2 |
1.54 |
0.37 |
5.0 |
83 |
0 |
1 |
2 |
7 |
1 |
0 |
0 |
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10 |
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1.69 |
1.78 |
20.7 |
0.57 |
-0.09 |
7.6 |
85 |
1 |
2 |
2 |
5 |
0 |
0 |
2 |
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11 |
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1.68 |
1.68 |
21.1 |
0.00 |
-0.36 |
7.2 |
86 |
1 |
1 |
2 |
4 |
0 |
0 |
1 |
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12 |
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1.65 |
1.65 |
21.6 |
0.36 |
-0.16 |
8.4 |
85 |
1 |
2 |
2 |
5 |
0 |
0 |
1 |
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13 |
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1.31 |
1.39 |
21.6 |
1.63 |
0.35 |
5.7 |
88 |
1 |
0 |
2 |
8 |
0 |
0 |
0 |
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14 |
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1.64 |
1.66 |
21.7 |
0.36 |
-0.21 |
3.7 |
95 |
2 |
0 |
4 |
3 |
1 |
1 |
0 |
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15 |
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1.90 |
2.69 |
21.9 |
1.41 |
0.48 |
3.5 |
80 |
0 |
1 |
1 |
7 |
2 |
0 |
0 |
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16 |
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2.03 |
2.75 |
21.9 |
1.45 |
0.53 |
3.4 |
76 |
0 |
1 |
1 |
6 |
2 |
0 |
1 |
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17 |
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1.55 |
1.61 |
23.7 |
0.75 |
0.14 |
3.9 |
76 |
2 |
0 |
2 |
6 |
1 |
2 |
2 |
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18 |
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1.55 |
1.61 |
24.6 |
0.49 |
0.03 |
4.4 |
75 |
2 |
0 |
2 |
6 |
1 |
2 |
1 |
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19 |
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1.63 |
1.66 |
24.9 |
0.31 |
-0.27 |
6.6 |
86 |
1 |
1 |
3 |
5 |
1 |
1 |
1 |
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20 |
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1.21 |
1.38 |
25.7 |
-0.06 |
-0.24 |
8.4 |
95 |
2 |
1 |
4 |
5 |
1 |
0 |
0 |
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21 |
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1.19 |
1.40 |
25.8 |
0.23 |
-0.12 |
5.6 |
82 |
2 |
0 |
3 |
5 |
1 |
2 |
1 |
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22 |
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1.38 |
1.37 |
26.2 |
0.47 |
-0.01 |
3.8 |
83 |
1 |
0 |
2 |
6 |
2 |
0 |
1 |
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23 |
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1.38 |
1.38 |
27.1 |
0.36 |
-0.05 |
4.1 |
81 |
1 |
0 |
2 |
7 |
2 |
0 |
1 |
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24 |
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1.68 |
1.68 |
32.8 |
0.57 |
0.07 |
8.7 |
83 |
3 |
1 |
3 |
8 |
2 |
0 |
2 |
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25 |
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1.68 |
1.68 |
33.7 |
0.56 |
0.09 |
8.8 |
83 |
3 |
1 |
3 |
8 |
2 |
0 |
1 |
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program