PDBsum entry 3a7f Go to PDB code:  Tunnel analysis for: 3a7f calculated with MOLE 2.0 PDB id 3a7f Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   5 tunnels, coloured by tunnel radius 5 tunnels, coloured by tunnel radius 5 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.21 3.13 27.8 0.32 -0.02 13.3 84 2 3 1 8 1 0 0   2 1.18 1.18 28.5 0.09 -0.10 16.0 87 2 3 1 8 1 0 0   3 1.22 1.35 40.6 -0.02 0.28 17.7 77 3 5 0 8 3 0 0   4 1.18 1.18 41.4 -0.14 0.24 19.6 79 3 5 0 9 3 0 0   5 1.36 1.46 17.3 -0.78 -0.11 15.0 92 1 1 2 3 0 1 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.