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PDBsum entry 3a5j

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Cleft analysis for: 3a5j PDB id
3a5j
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Binding-site(s)
Binding-surface(s)
Coloured by
 cleft (as in table below)
 closest atom type
 residue type
 residue conservation
Clefts
R1
ratio
Accessible
vertices
Buried
vertices
Average
depth
Residue..type
Ligands
Volume
1 1309.50 1.39 58.48 8 8.27 5 8.50 4 5 3 3 5 4 2 1  
2 942.89 0.00 70.60 1 8.38 4 8.72 3 3 3 6 4 3 3 1  
3 1500.61 0.00 62.91 4 9.20 3 6.76 8 6 4 5 10 2 4 0  
4 1636.88 0.00 63.87 2 6.44 8 7.21 7 7 8 7 12 3 0 0  
5 1054.69 0.00 62.66 5 6.13 9 10.11 1 5 6 9 2 1 0 0  
6 554.34 0.00 61.39 7 9.88 2 9.66 2 2 2 1 5 0 1 0  
7 777.94 0.00 62.37 6 6.73 6 6.72 9 5 1 5 6 1 1 1  
8 554.77 0.00 57.38 9 11.30 1 8.01 5 4 1 4 3 1 1 0  
9 467.44 0.00 63.48 3 6.64 7 6.24 10 4 4 3 2 2 0 0  
10 541.27 0.00 55.98 10 5.23 10 7.43 6 2 3 2 2 1 1 0  
 Protein structure

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C
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