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PDBsum entry 3a4z
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Pore analysis for: 3a4z calculated with  MOLE 2.0
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PDB id
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3a4z
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Pores calculated on whole structure |
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Pores calculated excluding ligands
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14 pores,
coloured by radius |
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20 pores,
coloured by radius
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20 pores,
coloured as in
list below
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Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.86 |
3.11 |
26.1 |
-2.49 |
-0.64 |
28.5 |
86 |
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6 |
3 |
2 |
2 |
1 |
0 |
0 |
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2 |
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1.86 |
3.12 |
27.9 |
-2.79 |
-0.61 |
27.8 |
83 |
5 |
3 |
3 |
3 |
1 |
1 |
0 |
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3 |
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1.89 |
3.13 |
28.8 |
-1.92 |
-0.62 |
22.4 |
87 |
5 |
3 |
3 |
2 |
1 |
0 |
0 |
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4 |
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2.22 |
2.83 |
29.8 |
-0.48 |
-0.10 |
12.8 |
84 |
6 |
1 |
1 |
4 |
1 |
2 |
0 |
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5 |
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1.86 |
3.11 |
32.3 |
-2.21 |
-0.54 |
27.9 |
87 |
7 |
4 |
3 |
3 |
1 |
0 |
0 |
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6 |
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3.04 |
3.26 |
34.0 |
-0.95 |
-0.26 |
15.6 |
87 |
4 |
2 |
5 |
2 |
1 |
2 |
0 |
ACT 4008 E
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7 |
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2.45 |
3.52 |
38.9 |
-1.56 |
-0.31 |
22.9 |
84 |
6 |
3 |
3 |
3 |
1 |
1 |
0 |
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8 |
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1.27 |
1.47 |
42.9 |
0.44 |
-0.03 |
4.5 |
74 |
1 |
1 |
1 |
10 |
1 |
3 |
1 |
HEM 412 E
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9 |
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1.29 |
1.47 |
42.8 |
0.21 |
0.04 |
7.8 |
75 |
2 |
2 |
0 |
11 |
2 |
3 |
1 |
HEM 412 E
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10 |
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1.39 |
1.57 |
44.3 |
0.29 |
0.21 |
9.7 |
76 |
3 |
2 |
0 |
10 |
2 |
4 |
0 |
HEM 412 E
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11 |
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1.30 |
1.50 |
48.3 |
0.02 |
-0.21 |
7.3 |
79 |
2 |
2 |
0 |
7 |
2 |
4 |
1 |
HEM 412 E
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12 |
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2.44 |
3.57 |
50.3 |
-1.55 |
-0.31 |
23.0 |
84 |
7 |
4 |
4 |
4 |
1 |
2 |
0 |
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13 |
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1.72 |
1.96 |
59.9 |
-1.26 |
-0.30 |
21.6 |
75 |
4 |
1 |
0 |
5 |
1 |
4 |
0 |
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14 |
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1.35 |
1.51 |
63.6 |
0.66 |
0.31 |
8.2 |
79 |
5 |
2 |
0 |
14 |
3 |
5 |
0 |
HEM 412 A
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15 |
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1.70 |
2.27 |
70.9 |
-2.24 |
-0.66 |
26.6 |
85 |
4 |
7 |
6 |
3 |
1 |
1 |
0 |
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16 |
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2.49 |
2.62 |
73.4 |
-1.18 |
-0.39 |
16.8 |
82 |
6 |
6 |
4 |
4 |
4 |
1 |
0 |
GOL 3001 A ACT 4001 D
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17 |
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1.76 |
2.38 |
101.6 |
-1.73 |
-0.42 |
21.4 |
84 |
9 |
10 |
7 |
5 |
5 |
2 |
0 |
GOL 3001 A ACT 4001 D
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18 |
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1.34 |
1.50 |
110.3 |
-0.29 |
0.02 |
15.6 |
80 |
13 |
7 |
0 |
17 |
3 |
6 |
0 |
HEM 412 A
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19 |
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1.34 |
1.50 |
161.0 |
-0.56 |
-0.10 |
14.4 |
81 |
14 |
7 |
5 |
18 |
3 |
10 |
0 |
HEM 412 A
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20 |
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1.37 |
1.55 |
47.5 |
0.53 |
0.30 |
10.3 |
79 |
4 |
2 |
1 |
12 |
2 |
4 |
0 |
HEM 412 C
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program