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PDBsum entry 3a2c

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Pore analysis for: 3a2c calculated with MOLE 2.0 PDB id
3a2c
Pores calculated on whole structure Pores calculated excluding ligands

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30 pores, coloured by radius 30 pores, coloured by radius 30 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.14 1.19 36.5 -1.65 -0.10 23.5 75 4 1 2 2 2 1 0  
2 1.96 2.11 49.1 -3.34 -0.71 35.1 82 9 3 5 0 0 0 0  
3 1.44 1.46 57.1 -3.18 -0.60 36.1 83 11 4 4 3 0 1 0  
4 1.46 1.58 69.2 -1.37 -0.23 17.4 89 8 2 4 7 1 1 0  
5 1.48 2.32 77.0 -2.62 -0.56 32.8 82 10 5 3 4 1 0 0  
6 1.49 1.50 101.0 -2.60 -0.56 26.6 81 13 2 7 3 3 2 0  
7 1.45 1.68 106.3 -1.47 -0.43 16.2 85 8 4 8 2 2 0 1  
8 1.55 1.60 112.6 -1.54 -0.39 18.0 86 11 4 8 7 2 1 1  
9 1.48 1.56 113.9 -1.59 -0.37 18.6 85 12 6 7 7 2 1 1  
10 1.61 1.94 124.5 -1.30 -0.41 16.8 86 6 4 9 6 1 2 1  PDY 2 B
11 1.45 1.61 126.8 -1.35 -0.24 14.0 80 9 6 5 3 6 1 1  
12 1.65 1.81 132.5 -1.33 -0.38 18.3 84 12 4 7 4 2 0 1  
13 1.44 1.69 135.6 -1.37 -0.28 17.9 84 12 4 7 5 4 1 1  
14 1.60 1.93 145.7 -1.99 -0.42 23.8 83 16 6 7 5 2 1 1  
15 1.37 1.53 143.1 -2.30 -0.45 24.1 79 13 8 7 2 4 2 1  
16 1.45 1.68 148.3 -2.14 -0.42 20.6 81 14 8 7 2 5 1 1  
17 1.75 1.75 149.9 -1.98 -0.44 23.6 83 15 6 11 6 1 2 2  
18 1.54 1.73 150.8 -1.49 -0.26 19.7 81 12 4 7 4 5 1 1  
19 1.42 1.42 158.8 -1.23 -0.44 13.4 86 11 4 12 7 4 0 2  
20 1.68 1.78 181.5 -1.37 -0.27 15.6 83 14 7 9 8 5 0 2  
21 1.45 2.36 182.7 -1.65 -0.41 22.4 80 14 8 9 8 2 3 2  PDY 2 B
22 1.39 1.38 199.6 -1.57 -0.32 17.2 84 10 10 15 8 3 3 0  
23 1.56 1.78 210.4 -1.30 -0.34 17.7 83 18 6 10 9 4 1 1  
24 1.55 1.64 213.5 -1.33 -0.34 16.3 82 11 11 9 6 5 3 1  
25 1.66 2.12 218.0 -1.68 -0.33 23.2 80 23 8 10 8 4 2 2  
26 1.15 1.15 226.9 -1.14 -0.33 15.9 82 19 6 11 9 7 0 2  
27 1.16 1.16 242.2 -1.21 -0.27 16.4 80 19 6 10 9 9 1 2  
28 1.42 1.54 245.6 -1.39 -0.29 14.7 83 12 10 13 9 8 2 1  
29 1.54 1.79 303.1 -1.12 -0.30 16.0 81 21 13 12 12 8 3 2  
30 1.54 1.79 318.5 -1.20 -0.24 16.6 80 21 13 11 12 10 4 2  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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