PDBsum entry 3a1q Go to PDB code:  Pore analysis for: 3a1q calculated with MOLE 2.0 PDB id 3a1q Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   4 pores, coloured by radius 4 pores, coloured by radius 4 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 3.23 3.53 27.4 -2.04 -0.66 30.2 84 4 6 2 2 0 0 0   2 1.29 1.66 28.6 -1.35 -0.41 17.6 84 3 1 3 2 1 0 0   3 1.29 1.65 32.0 0.28 -0.03 12.1 76 4 1 1 8 0 0 0   4 1.26 1.65 70.3 -1.22 -0.38 21.0 80 8 5 5 10 0 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.