PDBsum entry 2zyk Go to PDB code:  Pore analysis for: 2zyk calculated with MOLE 2.0 PDB id 2zyk Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   11 pores, coloured by radius 10 pores, coloured by radius 10 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 3.06 3.07 40.1 -2.59 -0.78 28.1 77 5 5 2 0 1 1 0  GLC 1 F GLC 2 F GLC 8 F 2 2.14 2.20 98.6 -2.21 -0.53 24.4 84 12 9 9 8 0 1 0  GLC 1 E GLC 2 E GLC 8 E GLC 1 G GLC 2 G GLC 3 G GLC 4 G GLC 5 G GLC 8 G 3 2.16 2.21 100.0 -1.87 -0.43 27.1 83 7 12 7 5 1 0 0  GLC 1 E GLC 2 E GLC 3 E GLC 4 E GLC 7 E GLC 8 E GLC 1 F GLC 2 F GLC 8 F 4 1.22 2.17 106.2 0.68 0.24 11.0 80 8 4 3 18 2 4 0   5 2.28 2.32 138.8 -2.11 -0.52 25.1 84 12 16 11 9 0 1 0  GLC 2 E GLC 3 E GLC 4 E GLC 1 F GLC 2 F GLC 8 F GLC 1 G GLC 2 G GLC 3 G GLC 4 G GLC 5 G 6 2.25 2.47 156.5 -2.19 -0.58 23.7 77 12 11 9 5 4 4 0   7 1.24 1.89 163.8 -0.74 -0.20 18.0 83 12 10 10 19 2 4 0  GLC 1 E GLC 2 E GLC 3 E GLC 4 E GLC 7 E GLC 8 E 8 2.92 3.55 202.7 -2.23 -0.62 24.7 82 15 13 11 5 2 3 0  GLC 1 F GLC 2 F GLC 8 F 9 1.21 1.52 213.4 -1.84 -0.50 21.2 81 13 10 13 8 3 5 0   10 1.93 3.30 211.0 -2.06 -0.55 26.1 79 16 14 8 8 5 2 0  GLC 1 G GLC 2 G GLC 3 G GLC 4 G GLC 5 G Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.