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PDBsum entry 2zub
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Tunnel analysis for: 2zub calculated with  MOLE 2.0
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PDB id
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2zub
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Tunnels calculated on whole structure |
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Tunnels calculated excluding ligands
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9 tunnels,
coloured by tunnel radius |
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9 tunnels,
coloured by
tunnel radius
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9 tunnels,
coloured as in
list below
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Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.38 |
1.38 |
22.4 |
-0.59 |
-0.36 |
17.3 |
92 |
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2 |
3 |
1 |
5 |
0 |
0 |
0 |
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2 |
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1.37 |
1.37 |
22.9 |
-0.63 |
-0.34 |
17.8 |
93 |
2 |
3 |
1 |
6 |
0 |
0 |
0 |
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3 |
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1.40 |
1.40 |
28.6 |
-1.48 |
-0.64 |
20.7 |
90 |
4 |
2 |
2 |
3 |
0 |
0 |
0 |
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4 |
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1.44 |
1.45 |
29.1 |
-1.48 |
-0.62 |
20.7 |
91 |
4 |
2 |
2 |
4 |
0 |
0 |
0 |
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5 |
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1.41 |
1.41 |
30.5 |
-1.46 |
-0.67 |
19.9 |
86 |
4 |
3 |
2 |
3 |
1 |
0 |
0 |
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6 |
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1.47 |
1.47 |
31.0 |
-1.39 |
-0.64 |
19.5 |
87 |
4 |
3 |
2 |
4 |
1 |
0 |
0 |
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7 |
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1.28 |
1.61 |
16.1 |
1.28 |
0.41 |
7.8 |
71 |
1 |
0 |
1 |
5 |
0 |
1 |
0 |
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8 |
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1.26 |
1.45 |
21.6 |
3.38 |
1.08 |
0.4 |
87 |
0 |
0 |
1 |
10 |
0 |
0 |
0 |
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9 |
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1.10 |
1.42 |
21.9 |
0.66 |
0.28 |
16.1 |
74 |
2 |
1 |
0 |
6 |
0 |
1 |
0 |
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program