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PDBsum entry 2zdu

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protein ligands links
Transferase PDB id
2zdu

 

 

 

 

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Contents
Protein chain
330 a.a. *
Ligands
446
Waters ×58
* Residue conservation analysis
PDB id:
2zdu
Name: Transferase
Title: Crystal structure of human jnk3 complexed with an isoquinolone inhibitor
Structure: Mitogen-activated protein kinase 10. Chain: a. Fragment: residues unp 39-402. Synonym: stress-activated protein kinase jnk3, c-jun n-terminal kinase 3, map kinase p49 3f12. Engineered: yes
Source: Homo sapiens. Human. Organism_taxid: 9606. Expressed in: escherichia coli. Expression_system_taxid: 562.
Resolution:
2.50Å     R-factor:   0.241     R-free:   0.319
Authors: S.Sogabe,T.Ohra,F.Itoh,N.Habuka,A.Fujishima
Key ref: Y.Asano et al. (2008). Discovery, synthesis and biological evaluation of isoquinolones as novel and highly selective JNK inhibitors (1). Bioorg Med Chem Lett, 16, 4715-4732. PubMed id: 18313304 DOI: 10.1016/j.bmc.2008.02.027
Date:
27-Nov-07     Release date:   23-Sep-08    
PROCHECK
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 Headers
 References

Protein chain
Pfam   ArchSchema ?
P53779  (MK10_HUMAN) -  Mitogen-activated protein kinase 10 from Homo sapiens
Seq:
Struc:
464 a.a.
330 a.a.
Key:    PfamA domain  Secondary structure  CATH domain

 Enzyme reactions 
   Enzyme class: E.C.2.7.11.24  - mitogen-activated protein kinase.
[IntEnz]   [ExPASy]   [KEGG]   [BRENDA]
      Reaction:
1. L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H+
2. L-threonyl-[protein] + ATP = O-phospho-L-threonyl-[protein] + ADP + H+
L-seryl-[protein]
+ ATP
= O-phospho-L-seryl-[protein]
+ ADP
+ H(+)
L-threonyl-[protein]
+ ATP
= O-phospho-L-threonyl-[protein]
+ ADP
+ H(+)
Molecule diagrams generated from .mol files obtained from the KEGG ftp site

 

 
    reference    
 
 
DOI no: 10.1016/j.bmc.2008.02.027 Bioorg Med Chem Lett 16:4715-4732 (2008)
PubMed id: 18313304  
 
 
Discovery, synthesis and biological evaluation of isoquinolones as novel and highly selective JNK inhibitors (1).
Y.Asano, S.Kitamura, T.Ohra, K.Aso, H.Igata, T.Tamura, T.Kawamoto, T.Tanaka, S.Sogabe, S.Matsumoto, M.Yamaguchi, H.Kimura, F.Itoh.
 
  ABSTRACT  
 
A novel series of 4-phenylisoquinolones were synthesized and evaluated as c-Jun N-terminal kinase (JNK) inhibitors. Initial modification at the 2- and 3-positions of the isoquinolone ring of hit compound 4, identified from high-throughput screening, led to the lead compound 6b. The optimization was carried out using a JNK1-binding model of 6b and several compounds exhibited potent JNK inhibition. Among them, 11g significantly inhibited cardiac hypertrophy in rat pressure-overload models without affecting blood pressure and the concept of JNK inhibitors as novel therapeutic agents for heart failure was confirmed.
 

Literature references that cite this PDB file's key reference

  PubMed id Reference
21276204 J.Du, L.Xi, B.Lei, H.Liu, and X.Yao (2011).
Structural Requirements of Isoquinolones as Novel Selective c-Jun N-terminal Kinase 1 Inhibitors: 2D and 3D QSAR Analyses.
  Chem Biol Drug Des, 77, 248-254.  
The most recent references are shown first. Citation data come partly from CiteXplore and partly from an automated harvesting procedure. Note that this is likely to be only a partial list as not all journals are covered by either method. However, we are continually building up the citation data so more and more references will be included with time.

 

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