spacer
spacer

PDBsum entry 2zdq

Go to PDB code: 
Top Page protein ligands Protein-protein interface(s) clefts links
Cleft analysis for: 2zdq PDB id
2zdq
View options
Binding-site(s)
Binding-surface(s)
Coloured by
 cleft (as in table below)
 closest atom type
 residue type
 residue conservation
Clefts
R1
ratio
Accessible
vertices
Buried
vertices
Average
depth
Residue..type
Ligands
Volume
1 6771.52 3.16 67.90 5 11.76 3 19.33 1 14 17 14 29 15 28 0  
2 2146.08 0.00 76.52 2 12.06 1 14.89 4 8 7 4 14 5 8 0  
3 2729.95 0.00 74.46 3 10.97 4 19.01 2 10 14 12 17 7 12 0 DAL 401[A], DAL 402[A], ATP 1501[
A] (42 atoms)
4 2246.48 0.00 79.10 1 11.76 2 15.11 3 10 13 10 15 6 7 0 DAL 403[B], DAL 404[B], ATP 
1502[B] (42 atoms)
5 1215.42 0.00 66.60 6 10.13 5 10.14 6 5 2 1 8 3 4 0  
6 1167.75 0.00 69.32 4 9.20 7 10.71 5 5 2 1 10 2 4 0  
7 1164.38 0.00 63.85 8 9.62 6 10.10 7 2 4 3 6 2 2 0  
8 1118.39 0.00 65.50 7 8.79 9 8.68 8 4 4 4 2 4 4 0  
9 615.52 0.00 60.69 9 9.09 8 7.89 9 2 2 2 6 1 2 0  
10 713.39 0.00 59.80 10 6.66 10 7.63 10 1 2 1 6 2 3 0  
 Protein structure

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C
spacer
spacer