PDBsum entry 2zd9 Go to PDB code:  Pore analysis for: 2zd9 calculated with MOLE 2.0 PDB id 2zd9 Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   18 pores, coloured by radius 18 pores, coloured by radius 18 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.81 1.93 29.0 0.09 -0.27 3.5 93 1 1 2 7 0 1 0   2 1.61 1.63 38.6 2.04 0.48 1.1 83 0 0 1 8 1 0 0   3 1.55 1.55 38.8 -2.94 -0.50 37.0 88 6 1 1 2 0 0 0   4 1.21 1.46 51.6 0.59 0.03 4.2 85 2 0 1 11 1 1 0   5 1.31 1.47 61.1 0.92 0.08 3.4 88 2 0 1 13 1 1 0   6 1.77 2.21 78.4 -2.44 -0.58 22.6 86 7 3 5 2 2 1 0   7 1.27 1.50 80.3 0.47 0.04 7.5 91 3 0 2 13 1 1 0   8 1.24 1.40 94.1 -0.49 0.02 14.5 81 4 2 5 8 2 1 0   9 1.56 1.56 99.7 -2.65 -0.45 31.7 80 13 4 2 3 3 1 0   10 1.70 4.29 101.6 -1.79 -0.42 22.0 87 9 3 5 7 2 1 0   11 1.29 1.72 107.3 -0.19 -0.07 13.3 87 8 1 3 15 1 1 0   12 1.59 4.32 109.3 -2.72 -0.50 29.5 84 15 4 5 3 2 1 0   13 1.32 1.73 113.4 0.05 -0.02 12.0 82 7 1 3 21 1 1 0   14 1.27 1.49 114.3 1.13 0.27 3.1 85 2 0 3 21 4 1 0   15 1.40 1.43 119.1 0.52 0.10 5.7 88 3 0 3 19 3 2 0   16 1.34 1.79 125.3 -1.34 -0.20 16.6 86 9 2 5 7 3 0 0   17 1.37 1.86 142.7 -0.02 0.01 7.0 88 5 1 5 16 4 1 0   18 1.20 1.42 200.9 0.88 0.39 6.2 75 2 1 3 22 6 2 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.