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PDBsum entry 2yzm

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Top Page protein ligands Protein-protein interface(s) clefts links
Cleft analysis for: 2yzm PDB id
2yzm
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Binding-site(s)
Binding-surface(s)
Coloured by
 cleft (as in table below)
 closest atom type
 residue type
 residue conservation
Clefts
R1
ratio
Accessible
vertices
Buried
vertices
Average
depth
Residue..type
Ligands
Volume
1 6594.75 1.16 67.86 5 13.19 4 16.96 1 17 15 16 29 9 14 1 DAL 401[A] (6 atoms)
2 5664.52 0.00 63.47 9 13.99 2 16.71 2 11 11 9 25 6 10 0  
3 4580.30 0.00 69.17 4 12.21 5 14.12 4 14 13 12 21 6 12 1 DAL 402[B] (6 atoms)
4 3847.92 0.00 74.02 2 13.53 3 14.11 5 12 12 13 20 6 8 1 DAL 403[C] (6 atoms)
5 2606.34 0.00 67.76 6 10.67 7 14.97 3 6 6 2 13 8 14 0  
6 2013.19 0.00 74.65 1 14.01 1 10.65 7 7 6 7 14 4 8 0  
7 1103.20 0.00 69.94 3 12.00 6 11.54 6 5 2 1 7 3 4 0  
8 1333.97 0.00 64.77 7 8.99 9 9.63 8 5 3 1 7 3 5 0  
9 1144.12 0.00 64.15 8 9.45 8 8.93 9 4 4 3 10 1 3 0  
10 1013.77 0.00 61.99 10 6.68 10 7.74 10 3 3 3 8 1 6 0  
 Protein structure

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C
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