PDBsum entry 2yy4 Go to PDB code:  Pore analysis for: 2yy4 calculated with MOLE 2.0 PDB id 2yy4 Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   4 pores, coloured by radius 4 pores, coloured by radius 4 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 3.08 3.63 31.5 -1.45 -0.53 24.5 82 7 3 1 3 1 0 0   2 1.92 2.11 40.5 -1.65 -0.31 12.9 86 3 1 6 1 2 0 0   3 2.51 2.50 41.9 -1.28 -0.58 19.2 80 6 2 3 3 1 0 0   4 1.91 2.30 60.4 -1.00 -0.18 11.6 85 3 2 7 1 3 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.