PDBsum entry 2ywp Go to PDB code:  Tunnel analysis for: 2ywp calculated with MOLE 2.0 PDB id 2ywp Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   4 tunnels, coloured by tunnel radius 3 tunnels, coloured by tunnel radius 3 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.71 1.83 15.6 -0.32 -0.17 15.7 82 1 3 3 3 2 0 0  A42 1 A 2 1.27 1.58 27.6 -0.29 0.14 14.3 86 1 2 3 5 2 0 0  A42 1 A 3 1.13 1.13 15.9 -1.34 -0.35 15.8 75 3 2 1 1 2 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.