PDBsum entry 2ysz Go to PDB code:  Tunnel analysis for: 2ysz calculated with MOLE 2.0 PDB id 2ysz Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   6 tunnels, coloured by tunnel radius 6 tunnels, coloured by tunnel radius 6 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.45 2.28 15.3 0.20 0.27 3.5 71 0 1 2 0 3 1 0   2 1.46 2.62 15.6 0.02 0.08 8.4 73 1 2 1 1 3 1 0   3 1.45 2.31 16.1 -0.16 0.31 4.9 72 1 1 2 0 3 1 0   4 1.55 1.55 16.0 0.51 -0.11 7.3 96 1 1 1 3 0 0 0   5 1.55 1.56 17.8 0.32 -0.21 6.3 92 0 2 1 3 0 1 0   6 1.55 1.56 18.1 0.26 -0.14 9.7 90 1 1 1 4 0 1 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.