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PDBsum entry 2ydw

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protein ligands Protein-protein interface(s) links
Nuclear protein PDB id
2ydw

 

 

 

 

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Contents
Protein chain
107 a.a.
Ligands
WSH ×3
SO4
Waters ×306
PDB id:
2ydw
Name: Nuclear protein
Title: Crystal structure of the first bromodomain of human brd2 with the inhibitor gw841819x
Structure: Bromodomain-containing protein 2. Chain: a, b, c. Fragment: n-terminal bromodomain, residues 67-200. Synonym: o27.1.1, really interesting new gene 3 protein, human brd2. Engineered: yes
Source: Homo sapiens. Human. Organism_taxid: 9606. Expressed in: escherichia coli. Expression_system_taxid: 562
Resolution:
1.90Å     R-factor:   0.202     R-free:   0.250
Authors: C.Chung,C.Delves,R.Woodward,O.Mirguet,E.Nicodeme
Key ref: C.W.Chung et al. (2011). Discovery and characterization of small molecule inhibitors of the BET family bromodomains. J Med Chem, 54, 3827-3838. PubMed id: 21568322
Date:
24-Mar-11     Release date:   15-Jun-11    
PROCHECK
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 Headers
 References

Protein chains
Pfam   ArchSchema ?
P25440  (BRD2_HUMAN) -  Bromodomain-containing protein 2 from Homo sapiens
Seq:
Struc:
 
Seq:
Struc:
801 a.a.
107 a.a.
Key:    PfamA domain  Secondary structure  CATH domain

 

 
J Med Chem 54:3827-3838 (2011)
PubMed id: 21568322  
 
 
Discovery and characterization of small molecule inhibitors of the BET family bromodomains.
C.W.Chung, H.Coste, J.H.White, O.Mirguet, J.Wilde, R.L.Gosmini, C.Delves, S.M.Magny, R.Woodward, S.A.Hughes, E.V.Boursier, H.Flynn, A.M.Bouillot, P.Bamborough, J.M.Brusq, F.J.Gellibert, E.J.Jones, A.M.Riou, P.Homes, S.L.Martin, I.J.Uings, J.Toum, C.A.Clement, A.B.Boullay, R.L.Grimley, F.M.Blandel, R.K.Prinjha, K.Lee, J.Kirilovsky, E.Nicodeme.
 
  ABSTRACT  
 
No abstract given.

 

Literature references that cite this PDB file's key reference

  PubMed id Reference
22722403 A.C.Belkina, and G.V.Denis (2012).
BET domain co-regulators in obesity, inflammation and cancer.
  Nat Rev Cancer, 12, 465-477.  
22498752 C.H.Arrowsmith, C.Bountra, P.V.Fish, K.Lee, and M.Schapira (2012).
Epigenetic protein families: a new frontier for drug discovery.
  Nat Rev Drug Discov, 11, 384-400.  
21964340 M.A.Dawson, R.K.Prinjha, A.Dittmann, G.Giotopoulos, M.Bantscheff, W.I.Chan, S.C.Robson, C.W.Chung, C.Hopf, M.M.Savitski, C.Huthmacher, E.Gudgin, D.Lugo, S.Beinke, T.D.Chapman, E.J.Roberts, P.E.Soden, K.R.Auger, O.Mirguet, K.Doehner, R.Delwel, A.K.Burnett, P.Jeffrey, G.Drewes, K.Lee, B.J.Huntly, and T.Kouzarides (2011).
Inhibition of BET recruitment to chromatin as an effective treatment for MLL-fusion leukaemia.
  Nature, 478, 529-533.
PDB code: 3zyu
The most recent references are shown first. Citation data come partly from CiteXplore and partly from an automated harvesting procedure. Note that this is likely to be only a partial list as not all journals are covered by either method. However, we are continually building up the citation data so more and more references will be included with time. Where a reference describes a PDB structure, the PDB code is shown on the right.

 

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