PDBsum entry 2yba Go to PDB code:  Pore analysis for: 2yba calculated with MOLE 2.0 PDB id 2yba Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   6 pores, coloured by radius 6 pores, coloured by radius 6 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.78 2.75 37.7 -2.06 -0.41 28.6 79 6 5 2 2 0 1 0   2 1.24 1.22 48.0 -1.72 -0.48 17.0 80 5 2 6 1 3 1 0   3 1.97 2.11 55.6 -0.82 -0.16 21.4 79 6 4 3 9 1 1 0   4 1.86 2.75 61.5 -0.78 0.06 22.4 80 9 4 4 10 2 0 0   5 1.24 1.23 68.9 -1.61 -0.44 19.3 81 7 5 6 2 2 2 0   6 1.27 1.26 92.2 -0.92 -0.14 16.8 81 10 2 9 10 4 1 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.