PDBsum entry 2y1n Go to PDB code:  Pore analysis for: 2y1n calculated with MOLE 2.0 PDB id 2y1n Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   5 pores, coloured by radius 7 pores, coloured by radius 7 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.43 2.22 42.1 -1.32 -0.42 17.1 82 4 4 2 4 3 0 0   2 1.39 2.18 43.5 -1.72 -0.43 20.9 79 4 5 1 3 3 0 0   3 1.33 1.49 51.7 -0.06 -0.14 11.3 73 4 4 1 5 2 2 2  PTR 7 D 4 2.23 3.38 55.0 -2.46 -0.45 29.3 83 9 1 3 2 2 1 0   5 1.06 1.07 87.4 -1.35 -0.39 18.4 79 5 4 2 3 1 1 0   6 1.28 1.66 28.4 0.50 -0.03 9.6 69 4 3 1 4 1 0 2   7 2.25 2.45 54.4 -2.44 -0.39 31.2 81 5 6 3 3 0 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.