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PDBsum entry 2y1n

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protein ligands metals Protein-protein interface(s) links
Ligase/transferase PDB id
2y1n

 

 

 

 

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Contents
Protein chains
377 a.a.
Ligands
SER-ASP-GLY-PTR-
THR-PRO-GLU-PRO-
ALA
×2
Metals
_CA ×2
_ZN ×4
Waters ×340
PDB id:
2y1n
Name: Ligase/transferase
Title: Structure of c-cbl-zap-70 peptide complex
Structure: E3 ubiquitin-protein ligase. Chain: a, c. Fragment: residues 47-435. Synonym: cbl c-cbl, casitas b-lineage lymphoma proto-oncogene, proto- oncogenE C-cbl, ring finger protein 55, signal transduction protein cbl. Engineered: yes. Tyrosine-protein kinase zap-70 zap-70,70 kda zeta- associated protein, syk-related tyrosine kinase.
Source: Homo sapiens. Human. Organism_taxid: 9606. Expressed in: escherichia coli. Expression_system_taxid: 469008. Synthetic: yes. Organism_taxid: 9606
Resolution:
2.00Å     R-factor:   0.159     R-free:   0.180
Authors: H.Dou,G.J.Sibbet,D.T.Huang
Key ref: H.Dou et al. (2012). Structural basis for autoinhibition and phosphorylation-dependent activation of c-Cbl. Nat Struct Biol, 19, 184-192. PubMed id: 22266821
Date:
08-Dec-10     Release date:   18-Jan-12    
PROCHECK
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 Headers
 References

Protein chains
Pfam   ArchSchema ?
P22681  (CBL_HUMAN) -  E3 ubiquitin-protein ligase CBL from Homo sapiens
Seq:
Struc:
 
Seq:
Struc:
906 a.a.
377 a.a.
Key:    PfamA domain  Secondary structure  CATH domain

 Enzyme reactions 
   Enzyme class: E.C.2.3.2.27  - RING-type E3 ubiquitin transferase.
[IntEnz]   [ExPASy]   [KEGG]   [BRENDA]
      Reaction: S-ubiquitinyl-[E2 ubiquitin-conjugating enzyme]-L-cysteine + [acceptor protein]-L-lysine = [E2 ubiquitin-conjugating enzyme]-L-cysteine + N6- ubiquitinyl-[acceptor protein]-L-lysine

 

 
Nat Struct Biol 19:184-192 (2012)
PubMed id: 22266821  
 
 
Structural basis for autoinhibition and phosphorylation-dependent activation of c-Cbl.
H.Dou, L.Buetow, A.Hock, G.J.Sibbet, K.H.Vousden, D.T.Huang.
 
  ABSTRACT  
 
No abstract given.

 

Literature references that cite this PDB file's key reference

  PubMed id Reference
22902369 H.Dou, L.Buetow, G.J.Sibbet, K.Cameron, and D.T.Huang (2012).
BIRC7-E2 ubiquitin conjugate structure reveals the mechanism of ubiquitin transfer by a RING dimer.
  Nat Struct Mol Biol, 19, 876-883.
PDB code: 4auq
The most recent references are shown first. Citation data come partly from CiteXplore and partly from an automated harvesting procedure. Note that this is likely to be only a partial list as not all journals are covered by either method. However, we are continually building up the citation data so more and more references will be included with time. Where a reference describes a PDB structure, the PDB code is shown on the right.

 

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