spacer
spacer

PDBsum entry 2xzk

Go to PDB code: 
Top Page protein ligands metals Protein-protein interface(s) tunnels links
Tunnel analysis for: 2xzk calculated with MOLE 2.0 PDB id
2xzk
Tunnels calculated on whole structure Tunnels calculated excluding ligands

View options
MOLEonline 2.0 manipulation
and
visualization
with HETATM:
without HETATM:
 
9 tunnels, coloured by tunnel radius 20 tunnels, coloured by tunnel radius 20 tunnels, coloured as in
list below
Tunnels
Length
Hydropathy
Hydrophobicity
Polarity
Mutability
Residue..type
Ligands
Radius
1 1.59 16.8 -1.85 -0.58 25.7 85 3 2 1 0 1 0 0  501 K99 A
2 1.61 19.5 -2.64 -0.70 31.9 84 3 2 1 0 1 0 0  501 K99 A
3 2.15 19.8 -3.19 -0.61 29.7 82 4 3 3 0 2 0 0  500 FKD A,501 K99 A
4 1.56 20.6 -2.65 -0.70 32.0 82 4 2 1 0 1 0 0  501 K99 A
5 1.58 22.0 -3.05 -0.63 27.3 84 4 3 4 0 2 0 0  500 FKD A,501 K99 A
6 2.15 27.0 -3.07 -0.65 24.5 82 4 3 5 0 2 0 0  500 FKD A
7 1.58 29.2 -2.94 -0.67 22.8 84 4 3 6 0 2 0 0  500 FKD A
8 2.15 31.9 -2.81 -0.55 27.4 81 5 3 4 0 3 0 0  500 FKD A,501 K99 A
9 1.62 16.2 -1.72 -0.57 24.2 85 4 2 1 0 1 0 0  501 K99 B
10 1.87 16.7 -2.68 -0.42 25.6 79 3 3 2 1 2 0 0  500 FKD B,508 CL B
11 1.61 20.7 -2.60 -0.69 31.3 82 4 2 1 0 1 0 0  501 K99 B
12 2.04 21.3 -3.09 -0.62 26.2 80 3 3 4 0 2 0 0  500 FKD B
13 2.18 21.9 -3.23 -0.60 29.5 81 5 3 3 0 2 0 0  500 FKD B,501 K99 B
14 1.69 10.0 -1.17 -0.38 18.2 89 2 2 0 2 0 1 0  
15 2.30 9.6 -1.33 -0.16 16.0 68 2 1 2 1 2 1 0  
16 2.30 13.0 -1.42 -0.40 17.7 67 2 1 1 1 2 3 0  
17 2.44 10.9 -1.06 -0.25 12.7 67 2 1 1 1 2 2 0  
18 1.85 5.0 -0.74 -0.55 15.0 65 1 1 0 1 1 0 0  
19 1.71 8.1 -2.11 -0.28 19.3 69 2 1 0 0 1 1 0  
20 1.29 9.5 -2.08 -0.21 17.1 75 2 1 1 0 1 1 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program and visualized using Pymol 0.97rc.
spacer
spacer