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PDBsum entry 2xzi

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Top Page protein ligands metals Protein-protein interface(s) tunnels links
Tunnel analysis for: 2xzi calculated with MOLE 2.0 PDB id
2xzi
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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8 tunnels, coloured by tunnel radius 9 tunnels, coloured by tunnel radius 9 tunnels, coloured as in
list below
Tunnels
Length
Hydropathy
Hydrophobicity
Polarity
Mutability
Residue..type
Ligands
Radius
1 1.55 16.0 -1.81 -0.51 25.3 81 3 2 1 0 1 0 0  501 KDM A
2 1.56 19.5 -2.60 -0.70 31.5 84 3 3 1 0 1 0 0  500 KDM A,501 KDM A
3 2.18 21.8 -3.22 -0.56 29.4 81 5 3 3 0 2 0 0  500 KDM A,501 KDM A
4 2.19 24.2 -2.58 -0.59 20.0 83 4 3 5 1 2 0 0  500 KDM A
5 1.43 14.8 -2.44 -0.54 37.7 85 3 2 0 2 0 0 0  
6 2.34 9.1 -1.38 -0.30 18.4 67 2 1 1 1 2 2 0  
7 2.22 9.6 -1.08 -0.11 15.3 68 2 1 2 1 2 1 0  
8 1.57 8.7 -1.52 -0.53 14.7 93 1 0 1 2 0 1 0  
9 1.33 3.6 -0.01 -0.19 2.5 87 0 0 1 2 0 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program and visualized using Pymol 0.97rc.
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