spacer
spacer

PDBsum entry 2xy9

Go to PDB code: 
Top Page protein ligands metals tunnels links
Tunnel analysis for: 2xy9 calculated with MOLE 2.0 PDB id
2xy9
Tunnels calculated on whole structure Tunnels calculated excluding ligands

View options
MOLEonline 2.0 manipulation
and
visualization
with HETATM:
without HETATM:
 
5 tunnels, coloured by tunnel radius 10 tunnels, coloured by tunnel radius 10 tunnels, coloured as in
list below
Tunnels
Length
Hydropathy
Hydrophobicity
Polarity
Mutability
Residue..type
Ligands
Radius
1 1.78 35.0 -1.74 0.00 20.1 75 4 3 3 2 4 0 0  1636 3ES A
2 1.97 49.0 -1.87 -0.17 22.7 81 5 6 5 3 5 1 0  1635 3ES A,1636 3ES A
3 2.14 56.3 -1.32 -0.12 19.4 82 7 7 5 5 6 0 0  1635 3ES A,1636 3ES A
4 1.61 59.9 -1.37 -0.02 19.3 76 6 6 5 5 6 1 1  1635 3ES A,1636 3ES A
5 1.78 65.4 -1.04 -0.02 16.3 81 7 5 8 6 7 1 0  1635 3ES A,1636 3ES A
6 2.52 7.4 -0.48 -0.01 2.1 78 0 0 3 1 1 1 0  
7 2.46 11.5 -0.19 0.09 1.9 73 0 0 2 1 2 1 0  
8 1.25 13.2 -1.20 0.06 29.9 72 2 2 0 3 2 0 0  
9 1.89 5.2 -2.36 -0.72 19.0 91 1 2 1 0 0 0 0  
10 1.84 6.9 -2.43 -0.72 19.0 91 1 1 1 0 0 1 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program and visualized using Pymol 0.97rc.
spacer
spacer