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PDBsum entry 2xy9

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Cleft analysis for: 2xy9 PDB id
2xy9
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Binding-site(s)
Binding-surface(s)
Coloured by
 cleft (as in table below)
 closest atom type
 residue type
Clefts
R1
ratio
Accessible
vertices
Buried
vertices
Average
depth
Residue..type
Ligands
Volume
1 7894.12 2.26 85.14 1 17.73 1 22.71 1 21 18 33 40 22 11 2 ACT 1625[A], 3ES 1635[A], 3ES 
1636[A] (104 atoms)
2 3494.81 0.00 63.44 5 9.76 3 9.59 3 8 8 16 10 10 9 1  
3 1654.17 0.00 70.48 2 11.74 2 8.42 4 7 3 9 7 3 3 1  
4 2143.97 0.00 65.96 3 7.71 5 10.49 2 6 5 13 8 5 4 4  
5 1280.81 0.00 63.27 6 9.34 4 7.38 6 2 3 9 12 1 1 0  
6 1082.95 0.00 59.96 8 5.00 10 5.98 10 6 5 1 7 3 4 0  
7 742.50 0.00 63.61 4 7.61 6 7.29 7 1 3 5 3 1 4 0  
8 964.83 0.00 58.60 9 6.78 7 8.34 5 4 3 6 5 1 2 0 NAG 1629[A], FUC 1632[A], EPE 
1634[A] (10 atoms)
9 635.77 0.00 61.36 7 6.74 8 6.74 9 3 4 2 4 2 2 0  
10 636.19 0.00 51.53 10 5.85 9 6.86 8 3 2 4 2 1 1 0  
 Protein structure

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C
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