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PDBsum entry 2xxi

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Top Page protein ligands metals Protein-protein interface(s) pores links
Pore analysis for: 2xxi calculated with MOLE 2.0 PDB id
2xxi
Pores calculated on whole structure Pores calculated excluding ligands

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10 pores, coloured by radius 11 pores, coloured by radius 11 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 3.16 3.70 30.4 -2.26 -0.58 27.3 86 4 3 2 2 0 0 0  
2 2.65 3.58 33.8 -2.11 -0.47 33.4 79 6 5 1 4 0 1 0  
3 3.16 3.67 37.7 -1.64 -0.53 25.8 78 7 5 0 3 0 0 0  SO4 1304 A
4 3.16 3.71 42.2 -1.33 -0.39 21.6 85 5 4 2 5 0 0 0  
5 1.90 2.18 42.9 -2.74 -0.46 36.6 87 8 4 2 3 0 0 0  SO4 1304 A
6 2.19 3.27 43.2 -2.71 -0.47 33.3 83 8 6 3 2 1 1 0  
7 2.14 3.28 43.6 -2.97 -0.57 38.7 75 12 7 0 2 2 0 0  SO4 1304 A
8 1.85 1.94 44.7 -2.25 -0.53 23.2 83 6 4 3 1 1 0 0  SO4 1304 A
9 2.16 3.23 48.2 -2.77 -0.48 35.9 79 10 6 2 3 2 0 0  
10 1.85 2.04 50.3 -2.00 -0.46 24.7 82 4 4 2 1 2 0 0  
11 1.85 1.96 60.9 -2.12 -0.49 25.4 85 8 6 4 4 1 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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