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PDBsum entry 2xnd

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Top Page protein ligands metals Protein-protein interface(s) pores links
Pore analysis for: 2xnd calculated with MOLE 2.0 PDB id
2xnd
Pores calculated on whole structure Pores calculated excluding ligands

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22 pores, coloured by radius 23 pores, coloured by radius 23 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.82 1.98 26.2 -0.80 -0.25 17.6 83 4 2 3 3 0 1 0  
2 1.41 1.50 32.8 0.11 -0.15 11.7 87 4 3 2 6 1 0 0  ANP 600 D
3 1.75 1.87 74.9 -1.60 -0.35 24.4 88 9 7 8 10 0 1 0  
4 2.76 2.82 86.1 -2.34 -0.51 27.2 83 12 10 10 8 1 2 0  
5 1.24 2.11 89.0 -1.97 -0.66 24.4 83 10 12 7 5 0 2 0  
6 1.75 1.86 90.3 -1.40 -0.30 21.5 84 11 7 6 15 1 1 0  
7 1.19 1.40 104.9 -1.01 -0.24 20.0 84 11 12 6 14 3 1 0  ANP 600 D
8 1.19 1.45 114.6 -0.67 -0.21 18.4 82 10 10 3 18 3 0 0  ANP 600 D
9 1.31 1.41 128.2 -1.65 -0.36 21.9 80 12 11 11 10 7 4 0  
10 1.23 1.22 130.5 -1.16 -0.34 19.3 82 11 12 6 15 4 3 0  
11 1.18 1.45 128.5 -0.67 -0.20 18.8 83 13 12 7 20 2 1 0  ANP 600 D
12 1.19 1.40 130.9 -0.70 -0.18 20.0 85 14 14 4 20 2 0 0  ANP 600 D
13 1.19 1.26 132.0 -0.92 -0.20 17.0 81 10 8 7 16 7 3 0  
14 1.21 1.21 142.3 -1.45 -0.41 23.6 83 11 16 8 13 3 3 0  
15 1.24 1.26 146.3 -0.78 -0.28 19.0 84 10 12 4 20 3 2 0  
16 1.48 4.23 152.4 0.75 -0.05 6.6 96 4 7 9 36 2 2 0  
17 1.25 1.28 149.9 -1.20 -0.35 20.1 84 18 12 9 18 2 5 0  
18 1.21 1.20 157.8 -0.83 -0.28 17.4 81 13 14 3 18 4 6 0  
19 1.21 1.20 157.7 -0.97 -0.37 18.9 84 14 13 4 17 3 2 0  
20 1.19 1.38 161.4 -0.59 -0.23 17.8 84 11 17 2 21 4 2 0  ANP 600 D
21 1.20 1.42 174.0 -0.83 -0.20 19.1 83 15 13 2 21 4 4 0  ANP 600 D
22 1.26 1.29 189.4 -1.14 -0.29 20.7 82 14 14 2 18 4 6 0  
23 1.21 1.18 194.3 -1.26 -0.42 19.5 82 21 20 8 21 3 5 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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