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PDBsum entry 2xb2

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Top Page protein dna_rna ligands metals Protein-protein interface(s) tunnels links
Tunnel analysis for: 2xb2 calculated with MOLE 2.0 PDB id
2xb2
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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6 tunnels, coloured by tunnel radius 6 tunnels, coloured by tunnel radius 6 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.33 1.40 32.2 -0.23 -0.32 11.7 88 3 2 2 6 0 0 0  
2 1.33 1.48 33.8 -0.63 -0.27 15.4 88 3 2 5 6 1 0 0  
3 1.34 1.42 37.6 -0.12 -0.15 11.5 84 3 1 4 8 0 0 1  
4 1.32 1.34 43.3 -0.07 -0.12 10.9 84 4 3 5 8 1 0 1  
5 1.30 1.40 56.7 -0.34 -0.10 12.6 81 4 3 8 12 3 0 1  
6 1.29 1.57 15.0 -0.76 -0.48 8.8 77 2 1 1 3 0 1 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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